EY720106

Overview
NameEY720106
Unique NameEY720106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720106_ssr225 microsatellite EY720106_ssr225:225..236. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY720106 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 44/164 (26.83%), Postives = 79/164 (48.17%), Query Frame = 1 
Query:   97 TLPLTYFDTLWLKFPPSERLFFYQITDLTIDLFNSVIIPKXXXXXXXXXXXXXXXAGHIMWPADSAK-PAIYYFPDQNDGVSFTVAESDADFSHLTGNN--GNREAVEFHHLTPQL--SISDDKA-EVVAIQITLCSKQGCCISVLTHHAVIDGISKTMFERSW 570
            +LP+T+FD  WL     + L FY          ++VI P                +G+++ P  S + P   Y  D+ D ++  VAESD DF +L G+    + +     ++ P++  ++ D K   +VA+Q+T+   +G  +++  HH++ D  S  MF  +W
Sbjct:   27 SLPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDTVI-PNLKASLSLTLKHYVPLSGNLLMPIKSGEMPKFQYSRDEGDSITLIVAESDQDFDYLKGHQLVDSNDLHGLFYVMPRVIRTMQDYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAW 189
The following BLAST results are available for this feature:
BLAST of EY720106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR1.823e-1126.83Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-B02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720106 ID=EY720106; Name=EY720106; organism=Citrus sinensis; type=EST; length=860bp
CACGCGTCCGCGATCGTCATGGCAGAAAAACATAAAGTGAAAATACATTC
AGTTAGCAAAATCAGCCCGCCGTCGTCCGACTCAGTCACCGCCTCCACTC
TTCCACTCACCTACTTCGATACTCTGTGGCTAAAATTTCCACCTTCAGAA
CGCCTCTTTTTCTATCAAATCACTGACCTAACTATCGATTTATTCAACTC
AGTGATCATCCCGAAGCTCGCTGACTCTCTCTCTCTCACTCTCCTTCATT
ATCTCCCCCTCGCCGGTCACATAATGTGGCCTGCGGACTCCGCGAAGCCA
GCCATTTACTACTTCCCTGACCAAAACGACGGCGTCTCATTCACCGTTGC
TGAATCCGACGCTGACTTCAGCCACCTCACTGGCAATAACGGAAACCGCG
AAGCCGTTGAATTTCATCATCTGACGCCCCAGTTGTCCATATCCGACGAT
AAAGCTGAGGTGGTTGCTATACAAATAACTCTGTGTTCGAAACAAGGGTG
TTGCATCTCCGTCTTGACTCACCACGCTGTCATCGACGGGATAAGCAAAA
CAATGTTTGAGAGATCTTGGGGCTTATTTCTTGCAACAACTAATTCAGAT
GCAACAACNAGAACTTAGTAATTCTTCGATATTATTACCGCACCGACTAA
TCCCGTGCCTTGGACCGGACTCTCATCCAAGATCCGGAGGGGCTGGAGGT
TGGTTATGCGAAACACTGGCTGGGTTATCACTCTGAGAAGCGAAAGTTGA
GACTCGTTAGTATACCGGGTCCTAGAGGCACTCCAGCGTGGGTCGAATGA
CGTCGCATTGACCCGGAAGCAATGAGGAAAGGGGGGGACCGGGGGCCGCG
AATGAGGGGC
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