EY661566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S2_DICDI (AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum GN=ap1s2 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.493e-58 Identity = 101/140 (72.14%), Postives = 125/140 (89.29%), Query Frame = 1 Query: 19 FVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAE 438 F+LL+SRQGK RLTKWYSP+T KE+S+ RE+ ++L R PKLCNF+EW+ YK+++KRYASLYF +C D+EDNEL +LEIIHH+VEILDRYFG+VCELDLIFNFHKAYYILDE+++AGELQE+SKKTV RLI+ QD+L E Sbjct: 5 FLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGELQETSKKTVLRLISQQDTLLE 144
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S2_MOUSE (AP-1 complex subunit sigma-2 OS=Mus musculus GN=Ap1s2 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.717e-51 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKE 450 +QF+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E AKE Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEDAKE 146
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S2_BOVIN (AP-1 complex subunit sigma-2 OS=Bos taurus GN=AP1S2 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.717e-51 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKE 450 +QF+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E AKE Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEDAKE 146
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S2_HUMAN (AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.954e-50 Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKEQASSISNI 474 +QF+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E A+ S + I Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEI 154
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S1_SCHPO (AP-1 complex subunit sigma-1 OS=Schizosaccharomyces pombe GN=SPAP27G11.06c PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.686e-49 Identity = 91/160 (56.88%), Postives = 126/160 (78.75%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKEQASSISNIIARATK 492 I+F LL+SRQGKVRL KW++ + KER+K+IR++S +++TR PK+CNFVE++G K+VY+RYASL+F I+Q+DNEL ILE+IH +VE LD+YFG+VCELDLIFNF KAYY+++E+L+AGELQESSK V + A D+ +E A Q S+ ++ K Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAGELQESSKTNVLSAVLAGDAESE-ADAQQDSLQKLVGSVKK 161
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S1_MOUSE (AP-1 complex subunit sigma-1A OS=Mus musculus GN=Ap1s1 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.075e-48 Identity = 89/154 (57.79%), Postives = 117/154 (75.97%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKEQASSISNI 474 ++F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 2 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S1_HUMAN (AP-1 complex subunit sigma-1A OS=Homo sapiens GN=AP1S1 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.075e-48 Identity = 89/154 (57.79%), Postives = 117/154 (75.97%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKEQASSISNI 474 ++F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 2 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S1_BOVIN (AP-1 complex subunit sigma-1A OS=Bos taurus GN=AP1S1 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.075e-48 Identity = 89/154 (57.79%), Postives = 117/154 (75.97%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKEQASSISNI 474 ++F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 154
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S3_MOUSE (AP-1 complex subunit sigma-3 OS=Mus musculus GN=Ap1s3 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.685e-47 Identity = 84/146 (57.53%), Postives = 111/146 (76.03%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETAKE 450 I F+LL SRQGK+RL KWY+ KER K+ R++ +L+RG + +F++W+ K+VYKRYASLYFC I+ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I GE+QE+SKKT + I D L ET +E Sbjct: 2 IHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAIEDSDMLQETMEE 147
BLAST of EY661566 vs. ExPASy Swiss-Prot
Match: AP1S3_HUMAN (AP-1 complex subunit sigma-3 OS=Homo sapiens GN=AP1S3 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.110e-45 Identity = 84/144 (58.33%), Postives = 108/144 (75.00%), Query Frame = 1 Query: 13 IQFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLAETA 444 I F+LL SRQGK+RL KWY KER K+ RE+ +IL+RG + +FV+W+ K+VYKRYASLYFC I+ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I GE+QE+SKK + I D L E + Sbjct: 2 IHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQEVS 145 The following BLAST results are available for this feature:
BLAST of EY661566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661566 ID=EY661566; Name=EY661566; organism=Citrus sinensis; type=EST; length=551bpback to top |