EY661559

Overview
NameEY661559
Unique NameEY661559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY661559 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18
Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 2 
Query:    5 ASANLERMNFWNCTGLAHIPSYVQNFNKLGNMIMAGCESLRCFPQNIHFISSIKIDCYKCVNLREFPRISGNVVELNLMCTPIEEVPLSIECLPNLETLEMSFCCSLKRLSTSICKLKSLRSLDLSYCINLESFPXXXXXXXXXXXXXXXXASNIKELPSSIENLEGLKQL 517
            ++ NLE ++   C  L  +   +    KL  + + GC  L   P  +   S   ++   C  L  FP IS NV EL +  T I+E+P SI+ L  LE L++     LK L TSI KLK L +L+LS CI+LE FP                 ++IKELPSSI  L  L +L
Sbjct: 1279 SATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFP-DSSRRMKCLRFLDLSRTDIKELPSSISYLTALDEL 1448
The following BLAST results are available for this feature:
BLAST of EY661559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK19_ARATH6.435e-1836.26Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661559 ID=EY661559; Name=EY661559; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGCAAATCTCGAGAGAATGAATTTTTGGAATTGCACAGGCT
TGGCTCACATTCCCTCGTACGTCCAGAATTTTAACAAACTTGGTAACATG
ATTATGGCTGGCTGTGAAAGTCTTAGGTGCTTTCCGCAGAACATTCATTT
CATATCTTCCATTAAGATTGATTGCTACAAGTGTGTTAATCTCAGAGAGT
TTCCAAGGATTTCAGGCAATGTAGTAGAACTAAACCTAATGTGTACTCCA
ATAGAAGAAGTTCCCTTATCAATCGAGTGCCTACCCAATCTTGAAACCTT
AGAAATGAGTTTTTGCTGTAGTCTTAAAAGGCTTTCAACTAGCATTTGTA
AATTGAAATCTCTTCGCAGCCTTGATCTTAGTTATTGTATAAACCTTGAG
AGTTTCCCAGAAATCTTGGAGAAAATGGAACTACTAGAAGAAATTAATTT
AGAGGAGGCAAGTAATATCAAAGAGCTGCCATCTTCAATCGAAAATCTAG
AAGGGCTTAAGCAGTTAAAGTTGACTGGTTGCACTAAACTTGGCAGTTTG
CCAGAGAGCTTGGGCAATTTAAATCTTTGGAAACGTCTCATGCAGGGTTA
TTGGCAATTCCTCANGTACCATCCTCCCATGTTGATTTAACAAACTTGAA
ACCCCTTCGTTGTTTGAATGCAGGGGTTTGGNTATTGCCTCCCACTATAT
CGGNTTTATCTTNCTTGAAAAAGCTAGAACTAGGAGACTGGGAGATNATG
GNAATCCCTCCGATATNGNCTGTCTATCATCATTGGAAAGTTTAATCTGA
GTGAAAATACTTTGAGAGTTACCTACAAGATCCGCCACTTTCCCGGCTAA
ATGGTTTACTGGNNCAATGCGTCAGCTCAGCCGTACCGACCTCCCTGCTT
TGGTATGTAAG
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