EY660830

Overview
NameEY660830
Unique NameEY660830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 6.437e-95
Identity = 173/262 (66.03%), Postives = 208/262 (79.39%), Query Frame = 3
Query:   12 RQAASVTEETISSAHHYLNNGGMWSLSGMSDRGPSKYSMSVSMYRGGGGV--YDMXXXXXXXXXXXXXXXRIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDSQDAAYEKRDYDMMLAHK 791
            RQA  VTEE+ISS ++YLNNGG+WS+SGM+     +YSMSV MYRGGGG    +                RI YLGMPIV AVTELL+AQFMWLD+DN +KPIYLYINS GTQNEK E+VG+ET+AYAIAD ++YCKS VYT+NCGMA+GQAAMLLS+G KGYR +QP+SSTKLYLP V RSSG   DMW KAK+L+AN E YIELLAKGTGK KE+I +DI+RPKY+QA+ AI YG+A++I DSQD+++EKRDYD  LA +
Sbjct:  110 RQAEKVTEESISSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQR 371          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.668e-34
Identity = 77/186 (41.40%), Postives = 117/186 (62.90%), Query Frame = 3
Query:  216 RIVYLGMPIVSA----------VTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDSQ 743
            RI+YLGMP+ S+          VTEL+IAQ ++L+FDN  KPIY YINS+GT     +++G ET+A+AI D M Y K  V+T+  G A G AAM+LS G  G R   P+++  L  P  G + G  +D+  +AK++ AN  + +E+ A+ TG+  + +A+D  R  YM   +A+ YGL ++++DS+
Sbjct:   33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLIDRVLDSR 217          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.715e-34
Identity = 72/182 (39.56%), Postives = 120/182 (65.93%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDSQDAAYEK 761
            RIVYLGM +V +VTEL++A+F++L +++  KPIYLYINS+GT  +  E +G +T+A+AI D M Y K  ++T+  G A+G+AA+LL+ GAKG R   P+S+  +  P + R  G  TD+    K+++      ++L +K  GK  E+I  D++RPKY    EA+ YG+ ++++ ++  + ++
Sbjct:  114 RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDR 293          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.412e-33
Identity = 77/185 (41.62%), Postives = 119/185 (64.32%), Query Frame = 3
Query:  216 RIVYLGMPIVSA----------VTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDS 740
            RIVYLGMP+ S+          VT+L+IAQ ++L FD+  KPIY YINS+GT     ++VG ET+A+AI D + Y K  V+T+  G A G AAM+LS G KGYR   P+++  L     G + G  TD+  +AK++ +N ++ +E+L+  TG+ +E++AKD+ R  Y+   +A  YGL +++++S
Sbjct:   31 RIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVLES 214          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.108e-33
Identity = 75/175 (42.86%), Postives = 118/175 (67.43%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSG--PVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQII 734
            RIVY+GMP+V AVTEL++A+ M+L + +  +PIY+YINS+GT  +  E+VG E++ +AI D++   K++V+TV  G A GQA +LLS G KG R + P++   +  P V  SSG  P +D+  +AK++  N +  +ELL+K TG   E +A  ++RP YM A +A  +G+ ++I+
Sbjct:  130 RIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRV-PSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27
Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIID 737
            RIVYLG PI   V ELLIAQ ++L+ ++ +KPI +YINS G         G ET A+A+ D M + +  + T+  G+A G +A+L++ G KG R   PNS   LY P  G + G  TD+  +A++L     +  +LL+  TGK  E+I KD +R  YM  +EA+ YGL +++++
Sbjct:   37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGV-------AGFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQP-YGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLE 202          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25
Identity = 69/177 (38.98%), Postives = 101/177 (57.06%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDSQD 746
            RIV LG PI   V  L++AQ ++L+  +  K IYLYINS G         G+ T   AI D M Y K  V T+  G A    A+LL+ GA G R   P+S   ++ P+ G   G  TD+   A++++   E  I++LAK TG+PK++IA DI+R  +M   EA  YGL +++I+ ++
Sbjct:   35 RIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------GSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPL-GGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVIEKRE 201          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.198e-24
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQII 734
            RI++LG  +   +   ++AQ ++LD +++SKPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LL  G+KG R   P+S   ++ P+ G      +D+  +AK++    +   +++A  TG+P E+I KD  R  +M A+EA  YGL +Q+I
Sbjct:   31 RIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.198e-24
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQII 734
            RI++LG  +   +   ++AQ ++LD +++SKPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LL  G+KG R   P+S   ++ P+ G      +D+  +AK++    +   +++A  TG+P E+I KD  R  +M A+EA  YGL +Q+I
Sbjct:   31 RIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194          
BLAST of EY660830 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24
Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 3
Query:  216 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLAEQIIDSQDAA 752
            RI++LG  +   V   L+AQ ++LD ++++KPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LLS G K  R   P+S   ++ P+ G S    +D+  +AK++    +     +A+ TG+P E+I KD  R  ++ AKEA  YGL +++I   + A
Sbjct:   31 RILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLSAKEAKDYGLIDKVISHPNEA 200          
The following BLAST results are available for this feature:
BLAST of EY660830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR1_ARATH6.437e-9566.03ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNE71.668e-3441.40Putative ATP-dependent Clp protease proteolytic su... [more]
CLPR4_ARATH3.715e-3439.56ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNY31.412e-3341.62Putative ATP-dependent Clp protease proteolytic su... [more]
CLPR3_ARATH4.108e-3342.86ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_GLOVI4.399e-2740.23ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_AQUAE4.117e-2538.98ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNE71.198e-2436.99ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP61.198e-2436.99ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_PROMA2.669e-2436.87ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-026-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660830 ID=EY660830; Name=EY660830; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCGGCAAGCAGCGAGTGTAACAGAGGAAACCATTTCTTCT
GCCCACCATTATTTGAATAATGGGGGGATGTGGAGTCTATCTGGCATGAG
TGATAGGGGCCCTTCAAAGTATAGTATGAGTGTGAGCATGTATCGTGGAG
GAGGTGGAGTATATGATATGCCCCAATCTGCTCCTCCTGACTTACCTTCT
TTGCTGTTAGATGCTCGGATTGTCTATCTTGGAATGCCGATTGTATCTGC
AGTGACTGAGCTTCTTATTGCTCAGTTTATGTGGTTGGATTTTGATAATG
CCTCAAAGCCTATATATCTATACATAAATTCCTCTGGGACACAGAATGAA
AAGAAGGAGAGTGTTGGAGCCGAAACTGATGCATATGCTATAGCTGATGC
CATGGCTTACTGCAAATCAAAAGTCTATACAGTAAATTGTGGCATGGCAT
ATGGTCAAGCAGCAATGCTTCTATCTGTTGGAGCAAAGGGTTACCGCGGT
TTACAGCCAAATTCTTCCACAAAATTATATTTGCCTGTCGTTGGTAGGTC
GAGTGGGCCCGTTACTGACATGTGGCGCAAGGCCAAAGATCTAGAAGCAA
ACGCTGAAAGCTACATTGAGCTATTAGCAAAAGGAACAGGAAAACCCAAG
GAAGAAATTGCTAAAGACATCCAACGACCTAAATACATGCAAGCAAAAGA
AGCTATAGTGTATGGCCTTGCAGAACAGATAATCGACTCACAGGATGCAG
CATATGAAAAACGGGATTACGATATGATGCTTGCTCACAAATGTCCATGG
AGAGANGAGCANGAGGTCACAAGCAGCTCCTTCTGGATTANGTGAAATAG
TGTACATATAGCTTAAATACTAAGAAGGGTCTGTTGATCCGTCAACTTTT
TGTCA
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