EY660797

Overview
NameEY660797
Unique NameEY660797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length537
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660797 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 7.583e-28
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 2
Query:   35 DIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 229
            DIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  228 DIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY660797 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.206e-27
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 2
Query:   35 DIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 235
            DIEGCPVPGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  227 DIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY660797 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.093e-13
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 2
Query:   38 IEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 223
            ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  226 VDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY660797 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 2
Query:   38 IEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 223
            ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  225 VDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY660797 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 2
Query:   38 IEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 223
            ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  225 VDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
The following BLAST results are available for this feature:
BLAST of EY660797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
XTH6_ARATH7.583e-2876.92Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.206e-2773.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.093e-1346.15Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.895e-1143.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH3.781e-1142.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-026-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660797 ID=EY660797; Name=EY660797; organism=Citrus sinensis; type=EST; length=537bp
TTCGTCGACCACGCGTCCGCGGACGCGTGTGTCTGATATTGAGGGCTGCC
CAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAG
GCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACAGATG
GGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATAAATCAAGAT
ACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACCCGCC
AATTAATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCATGTAT
ATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGTGTGAAAAGA
CTTATACGCATATCAAGGGAGGGGCGGGAGGGGAAATAAACATTGTGTGC
ATTTAAATGTAATTATGGGAGTGGGAAATATGTGGGTTTTCTGCTCTGCT
TGTACCATATATAAGTCTGAATTTGATGCACAGTATTCTGTGCCAATAAA
AGCTTCTTCATAATTGTGAAAAAAAAAAAAAAAAAAA
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