EY660580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_HAEIN (ATP-dependent DNA helicase recQ OS=Haemophilus influenzae GN=recQ PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.583e-19 Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 406 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPP-VIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 +L+ V+GY SFR GQ E I L+ + ++V+ TG GKSLCYQIPA+ GLTLV+ PL++LM DQ+ L I FL+SSQ E+ + + G +K+L+VS Sbjct: 19 VLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVS 125 HSP 2 Score: 25.409 bits (54), Expect = 3.583e-19 Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP-HTEVKGSYSS 865 EAHC+S+ H+F P +T++ G +S Sbjct: 150 EAHCISQWGHDFRPEYTQLGGLKAS 174
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_ECOLI (ATP-dependent DNA helicase recQ OS=Escherichia coli (strain K12) GN=recQ PE=1 SV=5) HSP 1 Score: 88.1965 bits (217), Expect = 1.733e-18 Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 403 RLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPP-VIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 ++L+ +GY FR GQ E I VL + ++V+PTG GKSLCYQIPA++L GLT+VV PL++LM DQ+ L + L+S+Q E+ E + G I++L+++ Sbjct: 15 QVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIA 122 HSP 2 Score: 25.7942 bits (55), Expect = 1.733e-18 Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGPHTEVKGSYSSR 868 EAHC+S+ H+F P G R Sbjct: 147 EAHCISQWGHDFRPEYAALGQLRQR 171
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_BACSU (Probable ATP-dependent DNA helicase recQ OS=Bacillus subtilis GN=recQ PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.734e-18 Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 406 LLRLVYGYDSFRDGQLEAIKMVLD-KKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 LL +GY+ FR GQ EAI++V + +++T ++PTG GKS+CYQIPA++ G T+V+ PL++LM DQ+ L I+ +++S+Q +E+ E + + GA K+ +++ Sbjct: 8 LLAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGTTIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYKLFYIT 115 HSP 2 Score: 24.2534 bits (51), Expect = 1.734e-18 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP 835 EAHC+S+ H+F P Sbjct: 140 EAHCISQWGHDFRP 153
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_PASMU (ATP-dependent DNA helicase recQ OS=Pasteurella multocida GN=recQ PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.806e-18 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 406 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQL-RHLPPVIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 +L V+GY SFR GQ E I L K +++++ TG GKSLCYQIPA+ GLTLV+ PL++LM DQ+ + L I +L+SSQ E + + G +K+L+VS Sbjct: 29 VLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSGTLKLLYVS 135 HSP 2 Score: 25.0238 bits (53), Expect = 3.806e-18 Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP-HTEVKG 853 EAHC+S+ H+F P +T++ G Sbjct: 160 EAHCISQWGHDFRPEYTQLGG 180
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_SALTY (ATP-dependent DNA helicase recQ OS=Salmonella typhimurium GN=recQ PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.391e-17 Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 403 RLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQL-RHLPPVIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 ++L+ +GY FR GQ I L + ++V+PTG GKSLCYQIPA++L GLT+VV PL++LM DQ+ + L + L+S+Q E+ E + G I++L+++ Sbjct: 15 QVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIA 122 HSP 2 Score: 25.7942 bits (55), Expect = 2.391e-17 Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGPHTEVKGSYSSR 868 EAHC+S+ H+F P G R Sbjct: 147 EAHCISQWGHDFRPEYAALGQLRQR 171
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ4_MOUSE (ATP-dependent DNA helicase Q4 OS=Mus musculus GN=Recql4 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.065e-17 Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 424 GYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMIL----PGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 GY +FR GQ AI +L ST+LVLPTGAGKSLCYQ+PA++ P LTLVV PL++LM DQ+ LP + L S ++ ++ + + VL VS Sbjct: 494 GYRAFRPGQERAIMRILSGISTLLVLPTGAGKSLCYQLPALLYAQRSPCLTLVVSPLLSLMDDQVSDLPSCLKAACLHSGMTKKQRESVLKKVRAAQVHVLIVS 597 HSP 2 Score: 24.2534 bits (51), Expect = 3.065e-17 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP 835 E HC+S+ HNF P Sbjct: 628 EVHCLSQWSHNFRP 641
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ4_HUMAN (ATP-dependent DNA helicase Q4 OS=Homo sapiens GN=RECQL4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.179e-17 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 424 GYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMIL----PGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 G+ +FR GQ A+ +L ST+LVLPTGAGKSLCYQ+PA++ P LTLVV PL++LM DQ+ LPP + + S ++ ++ I + VL ++ Sbjct: 477 GHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLCYQLPALLYSRRSPCLTLVVSPLLSLMDDQVSGLPPCLKAACIHSGMTRKQRESVLQKIRAAQVHVLMLT 580 HSP 2 Score: 25.7942 bits (55), Expect = 5.179e-17 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP 835 EAHC+S+ HNF P Sbjct: 606 EAHCLSQWSHNFRP 619
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ_SYNY3 (ATP-dependent DNA helicase recQ OS=Synechocystis sp. (strain PCC 6803) GN=recQ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 382 ASNENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHL 615 A ++L LR ++GYD FR Q E I +L ++ ++VLPTG GKS+C+Q+PA++ GLTLVV PLVALM DQ++ L Sbjct: 2 ADRQSLEEALRRIWGYDHFRYPQGEVIDCLLARRDCLVVLPTGGGKSICFQLPALLGEGLTLVVSPLVALMEDQVQSL 79
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: RECQ1_RAT (ATP-dependent DNA helicase Q1 OS=Rattus norvegicus GN=Recql PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 406 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEV 669 +LR V+ FR QLE + + +K LV+PTG GKSLCYQ+PA+ G TLV+CPL++LM DQL L + I L+SS E V Sbjct: 82 VLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHV 170
BLAST of EY660580 vs. ExPASy Swiss-Prot
Match: SGS1_YEAST (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae GN=SGS1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.888e-14 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 385 SNENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMI----LPGLTLVVCPLVALMIDQLRH-LPPVIHGGFLSSSQRPEEVAETIRLISVGAIKVLFVS 723 S+E L RL V+ FR QLEA+ L K +++PTG GKSLCYQ+PA++ G T+V+ PL++LM DQ+ H L I SS E+ +T L G + ++++S Sbjct: 663 SDEVLYRLHE-VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLDLVYIS 779 HSP 2 Score: 23.8682 bits (50), Expect = 7.888e-14 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 794 EAHCVSEGPHNFGP 835 EAHCVS H+F P Sbjct: 809 EAHCVSNWGHDFRP 822 The following BLAST results are available for this feature:
BLAST of EY660580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660580 ID=EY660580; Name=EY660580; organism=Citrus sinensis; type=EST; length=890bpback to top |