EY660558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.175e-46 Identity = 61/87 (70.11%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 299 QVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 QVIRM KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGRRTKNNPCLIGEPGVGK + + L Sbjct: 227 QVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 313 HSP 2 Score: 88.1965 bits (217), Expect = 3.175e-46 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ ++ + + + G KYRGEFEERL+K MEEI Q DEI LFIDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 305 GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARG 399 HSP 3 Score: 73.1738 bits (178), Expect = 2.384e-12 Identity = 39/52 (75.00%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 RVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQ 156 RVLELSLEEARQLGHNYIGS VAARVLENLGADPSNIRTQ Sbjct: 176 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 227
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.177e-46 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 368 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 NKMPTLEEYGTNLTKLAEEGKLDPVVGR PQIERVVQILGRRTKNNPCLIGEPGVGK + + L Sbjct: 199 NKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGL 262 HSP 2 Score: 88.1965 bits (217), Expect = 3.177e-46 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ + + + + + G KYRGEFEER++K MEEI Q DEI LFIDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 254 GKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFEERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARG 348 HSP 3 Score: 73.1738 bits (178), Expect = 2.384e-12 Identity = 39/52 (75.00%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 RVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQ 156 RVLELSLEEARQLGHNYIGS VAARVLENLGADPSNIRTQ Sbjct: 126 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 177
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.028e-46 Identity = 61/87 (70.11%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 299 QVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 QVIRM NK PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGRRTKNNPCLIGEPGVGK + + L Sbjct: 227 QVIRMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 313 HSP 2 Score: 87.0409 bits (214), Expect = 7.028e-46 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ ++ + + + G KYRGEFEERL+K MEEI Q D+I LFIDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 305 GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARG 399 HSP 3 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 37/52 (71.15%), Postives = 38/52 (73.08%), Query Frame = 1 Query: 1 RVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQ 156 RVLELS EEARQLGHNYIGS VAARVLENLGADP+NIRTQ Sbjct: 176 RVLELSQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQ 227
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.846e-45 Identity = 60/87 (68.97%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 299 QVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 QVIRM KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGK + + L Sbjct: 229 QVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 315 HSP 2 Score: 88.1965 bits (217), Expect = 5.846e-45 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ ++ + + + G KYRGEFEERL+K MEEI Q DEI LFIDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 307 GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARG 401 HSP 3 Score: 72.0182 bits (175), Expect = 5.311e-12 Identity = 38/52 (73.08%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 RVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQ 156 RVLELSLEEARQLGHNYIGS VAARVLENLGADP+NIRTQ Sbjct: 178 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQ 229
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.055e-41 Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 368 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGRRTKNNP LIGEPGVGK + + L Sbjct: 160 SKTPTLEEFGSNLTQMAMEGGLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGL 223 HSP 2 Score: 80.1073 bits (196), Expect = 4.055e-41 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ L+++ + + G KYRGEFEERL++ M+EI D + L IDE HTLI A A+GA+DAAN+L+P+LA+G Sbjct: 215 GKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARG 309 HSP 3 Score: 33.113 bits (74), Expect = 4.055e-41 Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3 Query: 813 KLQWIGATTLDEYRKPLEKIP 875 +LQ IGATTL+EYRK +EK P Sbjct: 310 ELQCIGATTLEEYRKHIEKDP 330
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.272e-41 Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 368 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 +K PTLEE+G+NLT++A EG LDPVVGRQ +IERV+QILGRRTKNNP LIGEPGVGK + + L Sbjct: 160 SKTPTLEEFGSNLTQMAIEGGLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGL 223 HSP 2 Score: 80.1073 bits (196), Expect = 5.272e-41 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ L+++ + + G KYRGEFEERL++ M+EI D + L IDE HTLI A A+GA+DAAN+L+P+LA+G Sbjct: 215 GKTAIAEGLAQRIANRDVPSILEDKLVITLDVGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPALARG 309 HSP 3 Score: 33.113 bits (74), Expect = 5.272e-41 Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3 Query: 813 KLQWIGATTLDEYRKPLEKIP 875 +LQ IGATTL+EYRK +EK P Sbjct: 310 ELQCIGATTLEEYRKHIEKDP 330
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.550e-39 Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 368 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 +K+PTLEE+GTNLT++A EGKLDPVVGR +IERVVQILGRRTKNNP LIGEPGVGK + + L Sbjct: 188 SKVPTLEEFGTNLTQMAVEGKLDPVVGRAKEIERVVQILGRRTKNNPVLIGEPGVGKTAIAEGL 251 HSP 2 Score: 82.4185 bits (202), Expect = 5.550e-39 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPWIWSSC-CGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ L+++ + S G KYRGEFEERL+K M+EI D + L IDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 243 GKTAIAEGLAQRIINNEVPDTLEDKKVITLDVSLLVAGTKYRGEFEERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARG 337
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.028e-37 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIP--LKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TA+AEGLA Q++ +P L+++ + + + G KYRGEFE+RL+K MEEI Q I LFIDE HTLI A A+GA+DA+NIL+PSLA+G Sbjct: 216 GKTAVAEGLAQ--QIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARG 310 HSP 2 Score: 80.8777 bits (198), Expect = 3.028e-37 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 377 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 PTL+ +LT A+EGK+DPV+GR +IERV+Q+L RRTKNNP LIGEPGVGK + + L Sbjct: 164 PTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAVAEGL 224 HSP 3 Score: 32.7278 bits (73), Expect = 3.028e-37 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 3 Query: 813 KLQWIGATTLDEYRKPLEK 869 +LQ IGATTLDEYRK +EK Sbjct: 311 ELQCIGATTLDEYRKYIEK 329
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.821e-37 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2 Query: 371 KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 K PTLEE+G+NLT+ A EGKLDPV+GRQ +IERV+QILGRRTKNNP LIGEPGVGK + + L Sbjct: 158 KTPTLEEFGSNLTQKAAEGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGL 220 HSP 2 Score: 78.5666 bits (192), Expect = 3.821e-37 Identity = 48/95 (50.53%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA R+ L+++ + I G KYRGEFEERL+K ++EI + + L IDE HTLI A A+GA+DAANIL+P+LA+G Sbjct: 212 GKTAIAEGLAQRINNRDVPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPALARG 306
BLAST of EY660558 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.458e-36 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 532 G*TAIAEGLAXRLQVVMFLIPLKERGYLPW-IWSSCCGNKYRGEFEERLEKPMEEIXQRDEIFLFIDEGHTLIRARTAKGAMDAANILEPSLAQG 813 G TAIAEGLA + LK++ + + + G KYRGEFEERL+K MEEI Q + LFIDE HTL+ A A+GA+DA+NIL+P+LA+G Sbjct: 213 GKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARG 307 HSP 2 Score: 78.5666 bits (192), Expect = 1.458e-36 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 368 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKQQLQKAL 559 N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNNP LIGEPGVGK + + L Sbjct: 158 NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGL 221 HSP 3 Score: 33.113 bits (74), Expect = 1.458e-36 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 3 Query: 813 KLQWIGATTLDEYRKPLEK 869 +LQ IGATTLDEYRK +EK Sbjct: 308 ELQCIGATTLDEYRKNIEK 326 The following BLAST results are available for this feature:
BLAST of EY660558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660558 ID=EY660558; Name=EY660558; organism=Citrus sinensis; type=EST; length=918bpback to top |