EY660556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.476e-82 Identity = 160/206 (77.67%), Postives = 171/206 (83.01%), Query Frame = 3 Query: 24 MAATTQASLFAPANFSTTKSSAPRKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 MA TQASLF PA S KSSAP KQS +SFS + LK I+AMAE + T EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGE QYLHPKDGVYPEK+N ++GVGQN+ IGKN SPIE KFTGKQ +DL Sbjct: 1 MAMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 4.019e-80 Identity = 156/208 (75.00%), Postives = 167/208 (80.29%), Query Frame = 3 Query: 24 MAATTQASLFAPANFSTTKSSAPRKQSS-SFSV-RPLKHNAPRTNTIKAMAE-GKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 MA TQASLF P ++AP KQS SFS + LK T I+AMAE T K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGE QYLHPKDGVYPEK+NP +EGVGQN+ IGKN S IE KFTGKQ +D+ Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 208
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 6.855e-80 Identity = 157/211 (74.41%), Postives = 170/211 (80.57%), Query Frame = 3 Query: 24 MAATTQASLFAPANFSTTKS---SAPRKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 MA TQA+LF P+ ST KS S P KQSS+ S +P A + + K AE +T EAP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGE QYLHPKDGVYPEK+NP +EGVGQN+ IGKNVSPIE KFTGKQ +DL Sbjct: 1 MAMATQATLFTPS-LSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 5.803e-79 Identity = 155/215 (72.09%), Postives = 172/215 (80.00%), Query Frame = 3 Query: 24 MAATTQASLFAPANFSTTKSSAPRKQSS-------SFSVRPL-KHNAPRTNTIKAMAEGKTE--TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 MA TQA+LF+P++ S+ K R +S +F+ +P +H++ R A AEGK T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFP+GE QYLHPKDGVYPEK+NP ++GVG N IGKNVSPIE KFTGKQ +DL Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRA---AAAAEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.438e-77 Identity = 149/204 (73.04%), Postives = 160/204 (78.43%), Query Frame = 3 Query: 30 ATTQASLFAPANFSTTKSSAPRKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPT-KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 AT A +F+PA +TT S+ + S S RP + +T E + P KEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGE QYLHPKDGVYPEK NP +EGVG N IGKNVSPIE KFTGKQ +DL Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 204
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 3.892e-75 Identity = 146/207 (70.53%), Postives = 154/207 (74.40%), Query Frame = 3 Query: 30 ATTQASLFAPANFSTTKSSAPRKQSSSFSVRP----LKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 AT A +F A + S + S + RP A R + A TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGE QYLHPKDGVYPEK NP +EGVG N IGKNVSPIE KFTGKQ +DL Sbjct: 2 ATQAAGIFNSAITTAATSGVKKLHFFSTTHRPKSLSFTKTAIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 9.922e-71 Identity = 142/212 (66.98%), Postives = 154/212 (72.64%), Query Frame = 3 Query: 24 MAATTQASL----FAPANFSTTKSSAPRKQSSSFSVR---PLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 MA TQAS A +S + P + S R PL AP T A P + AP GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGE QYLHPKDGVYPEK+N ++GVGQN+ IGKNVSPIE KFTGK D+ Sbjct: 1 MAMATQASAATRHLITAAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAA-------PPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI 205
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.439e-53 Identity = 109/184 (59.24%), Postives = 135/184 (73.37%), Query Frame = 3 Query: 75 TKSSAPRKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPV-GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGK 623 T++ A + SS +V + A R ++A AE K A +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNLLK +KEQCLAL T+LR+K+K+ FYRVFP+G+ QYLHP DGVYPEK+N + G QN IG+NV+PI+ KF+G+ Sbjct: 7 TQAPAATRASSRVAVAA-RPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGR 189
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.650e-47 Identity = 90/146 (61.64%), Postives = 112/146 (76.71%), Query Frame = 3 Query: 201 APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR G NLL+LARKEQC+ALG +L+ K+KI Y+ YRV+P+GE Q+LHPKDGV+PEK+NP + VG N IG+N P + KF G++ D Sbjct: 70 APKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRRIGQNPDPAKLKFKGQETFD 215
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_GUITH (Photosystem I reaction center subunit II OS=Guillardia theta GN=psaD PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.641e-44 Identity = 87/133 (65.41%), Postives = 105/133 (78.95%), Query Frame = 3 Query: 228 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGK 623 L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LARKEQCLALGT++++ +KI Y+ YR+FP+GE QYLHPKDGV+PEK+NP + GVG IGKN++P + KFT K Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLARKEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIGKNLNPAQIKFTNK 137 The following BLAST results are available for this feature:
BLAST of EY660556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660556 ID=EY660556; Name=EY660556; organism=Citrus sinensis; type=EST; length=850bpback to top |