EY660543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660543 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 9.148e-68 Identity = 158/302 (52.32%), Postives = 192/302 (63.58%), Query Frame = 3 Query: 9 GPDSLPDHASEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDSGKTIKFIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALGSITEVIQTVKRSQSHIR-ALSLDTTNKLEEKKKFNLDCALPASAENVNKSTPGRQTPQVGYGGEMSVQEAGRNSRKSGRNSL-MGLKVRSPSLAGKHEPQPSIAPEVFM--TKDLKWTDSWDRAKKEKDIPPRIDLPTTLGRIEENFVXXXXXXXXXXXXFASDSFLELTEYTREENFGEKLPGSSRT*NNQPLSQR-KNAVRNQ 899 GPD+ + + KIRD V+NGKSYCGRLLNYKKDGTPFWNLLTVTPIKDD G TIKFIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKAL SITEV+QT++ +S ++ ++S DT K ++ TPGRQT Q EA ++ R GR S G K++S + +HE + PE M T+ + DSWD + +E+DI IDL TTL RIE+NFV FASDSFLELTEY+REE G +Q Q+ ++A+R+Q Sbjct: 175 GPDTDKNEVA-KIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVK----------------PDSSTTPTPGRQTRQ--------SDEASKSFRTPGRVSTPTGSKLKSSN--NRHEDLLRMEPEELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQ 449
BLAST of EY660543 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.378e-51 Identity = 122/267 (45.69%), Postives = 158/267 (59.18%), Query Frame = 3 Query: 42 KIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDSGKTIKFIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALGSITEVIQTVKRSQSHIRALSLDTTNKLEEKKKFNLDCALPASAENVNKSTPGRQTPQVGYGGEMSVQEAGRNSRKSGRN---SLMGLKVRSPSLAGKHEP---QPSIAPEVFMTKDLKWTDSWDRAKKEKDIPPRIDLPTTLGRIEENFVXXXXXXXXXXXXFASDSFLELTEYTREENFG 824 KIR+ + G +YCGR+LNYKKDGT FWNLLT+ PIKD+SGK +KFIGMQVEVSK+TEG +KALRPNGL +SLIRYDARQK+ A S+TE+++ VKR RALS ++TN K D A ++++ G G S+Q K R S MG+K +S SL + + + +D + +S D ++K++ IDL TTL RIE+NFV FASDSFLELTEY+REE G Sbjct: 249 KIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELVEAVKRP----RALS-ESTNLHPFMTKSESDELPKKPARRMSENVVPSGRRNSGGGRRNSMQRINEIPEKKSRKSSLSFMGIKKKSESLDESIDDGFIEYGEEDDEISDRDER-PESVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG 509 HSP 2 Score: 26.9498 bits (58), Expect = 1.378e-51 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 811 KKILGKNCQVPQGPET 858 ++ILG+NC+ QGPET Sbjct: 505 EEILGRNCRFLQGPET 520 The following BLAST results are available for this feature:
BLAST of EY660543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660543 ID=EY660543; Name=EY660543; organism=Citrus sinensis; type=EST; length=935bpback to top |