EY660535

Overview
NameEY660535
Unique NameEY660535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.252e-78
Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFES 558
            VLALFPSSQGLEV WSSVVKIGQSL+REGPGKDPFRPDQKTPVKN FLAGSYTKQDYIDSMEGATLSGR+ SA+IC+AGEEL ALRKQLAA +S
Sbjct:  482 VLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQS 575          

HSP 2 Score: 143.28 bits (360), Expect = 2.252e-78
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQD+ERSRQLRQA GLDNLLYTPDADF CFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RV+K+V
Sbjct:  406 ELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQV 482          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.831e-78
Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPTTDDEL 597
            VLALFPSSQGLEV WSSVVKIGQSL+REGPGKDPFRPDQKTPV+N FLAGSYTKQDYIDSMEGATLSGR+ SAYIC+AGE+L+ALRK++AA E  E  +  +  DEL
Sbjct:  479 VLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNEISKGVSLSDEL 585          

HSP 2 Score: 141.739 bits (356), Expect = 3.831e-78
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQDLERSRQ ++A GLDNLLYTPDADF CFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EIIRRV+K+V
Sbjct:  403 ELQDLERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQV 479          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.579e-76
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPTTDDEL 597
            VLALFPSSQGLEV WSSV+KIGQSL+REGPGKDPFRPDQKTPV+N FLAGSYTKQDYIDSMEGATLSGR+ SAYICN GE+L+ALRK++ A E  +  +  +  DEL
Sbjct:  479 VLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELNDISKGVSLSDEL 585          

HSP 2 Score: 139.813 bits (351), Expect = 1.579e-76
Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQDLERSRQL++A GLDNLLYTPDADF CFADLAL SP+DYY EGQGSLLQCVLTPGDPYMPL NDEII+RV K+V
Sbjct:  403 ELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQV 479          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.449e-74
Identity = 82/108 (75.93%), Postives = 94/108 (87.04%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPT-TDDEL 597
            VL LFPSSQGLEV+WSSVVKIGQSL+REGPGKDPFRPDQKTPVKN FLAGSYTKQDYIDSMEGATLSGR+ +AYIC+AGE+L ALRK++AA   ++ +   +   DEL
Sbjct:  464 VLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVSDEL 571          

HSP 2 Score: 134.806 bits (338), Expect = 5.449e-74
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            E+QDLE+SRQLR A+GLDNLLYTPDADF CF+DLAL+SPEDYY EGQGSL+Q VLTPGDPYMPLPND II RV K+V
Sbjct:  388 EMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQV 464          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.485e-70
Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQM 570
            V+ LFPSS+GLEV WSSVVKIGQSL+RE PG DPFRPDQKTPVKN FL+GSYTKQDYIDSMEGATLSGR+TSAYIC AGEEL+ALRK+L   + ++ +
Sbjct:  464 VVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKLLIDDGEKAL 561          

HSP 2 Score: 128.642 bits (322), Expect = 3.485e-70
Identity = 60/77 (77.92%), Postives = 70/77 (90.91%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQDLE+SRQL++A+GLDNLLYT DADF CF+DLAL+SP DYY EGQGSL+Q VLTPGDPYMPLPN+EII +V K+V
Sbjct:  388 ELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQV 464          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 7.052e-68
Identity = 72/91 (79.12%), Postives = 81/91 (89.01%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAA 549
            V  LFPSS+GLEV WSSVVKI QSL+RE PGKDPFRPDQKTP+KN FLAGSYTKQDYIDSMEGATLSGR+ S+YIC+AGEEL  L K+L++
Sbjct:  456 VTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS 546          

HSP 2 Score: 128.257 bits (321), Expect = 7.052e-68
Identity = 59/77 (76.62%), Postives = 69/77 (89.61%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQD+E +RQL++A+GLDNLLYTPDADF CFADLAL SP DYY EGQG+LLQCVLTPGDPYM +PND+II +VA +V
Sbjct:  380 ELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQV 456          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.589e-48
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            ELQD  + +QL++A GLDNLLYT DADF CFADLALTSP DYYR+GQGSLLQ VLTPGDP++   N+ I + V K+V
Sbjct:  323 ELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQV 399          

HSP 2 Score: 104.76 bits (260), Expect = 1.589e-48
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYI 501
            V  LFPSS+ L + W SVVK+ QSL+RE PG D +RP+QKTP+ N FLAGSYT+QDYIDSMEGAT+SGR+ +  I
Sbjct:  399 VYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVI 473          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.101e-46
Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 3
Query:    3 ELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEV 233
            E+ D  + +QL QA GLDNLLYT DA+F CFADLALTSP DYYR G+GSLLQ VLTPGDP+M   N+ I  RV K+V
Sbjct:  324 EMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQV 400          

HSP 2 Score: 102.834 bits (255), Expect = 1.101e-46
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query:  277 VLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYI 501
            V ALFPS+  L + W SV+K+ QSL+RE PG D FRP Q TP+ N FLAGSYT+QDYIDSMEGATLSGR+ +  I
Sbjct:  400 VKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAI 474          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.120e-12
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  328 VVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFE 555
            VVK  +S+++  P  +P RP Q++P++  +LAG YT Q Y+ SMEGA LSG+  +  I    E LV   K+ +  E
Sbjct:  491 VVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSKKASTAE 566          

HSP 2 Score: 35.8094 bits (81), Expect = 1.120e-12
Identity = 19/63 (30.16%), Postives = 34/63 (53.97%), Query Frame = 3
Query:   54 DNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVGSV 242
            D+LL+T       +AD+++T  E  Y +   S+L+ V  P + ++   + EII R  KE+  +
Sbjct:  412 DHLLFTRSPLLSVYADMSVTCKE--YYDPNRSMLELVFAPAEEWISRSDSEIIERTMKELAKL 472          
BLAST of EY660535 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 9.041e-12
Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 1
Query:  328 VVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELV 525
            VVK  +S+++  PG +P R  Q++PV+  +LAG YTKQ Y+ SMEGA LSG+  +  I    E LV
Sbjct:  504 VVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLV 569          

HSP 2 Score: 33.113 bits (74), Expect = 9.041e-12
Identity = 18/63 (28.57%), Postives = 33/63 (52.38%), Query Frame = 3
Query:   54 DNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVGSV 242
            DNLL++       +AD+++T  E  Y +   S+L+ V  P + ++   + EII    KE+  +
Sbjct:  425 DNLLFSRSPLLSVYADMSVTCKE--YYDPNKSMLELVFAPAEEWVSRSDSEIIDATMKELAKL 485          
The following BLAST results are available for this feature:
BLAST of EY660535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ZDS_TARER2.252e-7889.36Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN3.831e-7879.44Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC1.579e-7676.64Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS5.449e-7475.93Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE3.485e-7077.55Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH7.052e-6879.12Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ANASP1.589e-4867.53Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
ZDS_SYNY31.101e-4666.23Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
CRTI_NARPS1.120e-1240.79Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_CAPAN9.041e-1246.97Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660535 ID=EY660535; Name=EY660535; organism=Citrus sinensis; type=EST; length=908bp
CTGAGTTGCAAGACCTAGAACGGTCAAGGCAATTGAGGCAAGCTCTGGGG
TTAGATAATCTTTTGTATACTCCAGATGCTGATTTCCCTTGCTTTGCAGA
TCTGGCACTCACTTCACCAGAAGACTACTACAGAGAAGGGCAAGGTTCAC
TGCTCCAATGTGTTTTAACACCTGGCGATCCTTACATGCCCTTACCAAAT
GATGAAATCATAAGGAGAGTGGCAAAGGAGGTTGGTAGTGTTCAGTGACA
CCTTCAATTCATATAATACATATTAGGTTTTGGCTCTATTTCCATCGTCC
CAGGGTTTAGAAGTTATTTGGTCATCTGTTGTCAAAATCGGGCAGTCTTT
GCACCGTGAGGGACCTGGTAAAGACCCCTTCAGACCTGATCAAAAGACAC
CAGTGAAGAACTTGTTCCTTGCTGGCTCATATACAAAACAGGATTACATA
GATAGCATGGAAGGAGCAACTTTGTCTGGTAGAAAAACCTCAGCATACAT
ATGCAATGCCGGGGAGGAATTAGTAGCACTGAGGAAGCAGCTTGCTGCCT
TTGAATCTCAAGAACAAATGGAAGCTCCGACTACTGATGATGAACTAAGT
GTTGTCTGATCACAATCTGTTTGAGGCGTGGCAGCAGGAGTAAGGTTTTT
CCACATCTAAACGCCCTTCACTTTTACACAATATTACATGGATAGTATGG
GATGAGCAATTTGCTGCCTTTAATTTGATCTCAAGAACAAAGGGAAATCC
AGCTTTGACTGATGAACTTANTAAATGATTGGGATGGTGGGGCTGGAAGT
ATGGTTTCCAATACCCATGTATTTCCATGAGATATCAGTTTTCATAATTC
ATTATTAAGTAATGGACAGGAGTCCTAAAAAAAAAAAAAAAAAAAAAAGG
GCGGCCCT
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