EY660534

Overview
NameEY660534
Unique NameEY660534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.270e-53
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P FTGLKAGA+ +  V  G++ K +A+ V +L++KA+LKDVG                  +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHN VFDEDEIP+GVD SKISMS EDLLN  GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   12 PSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 3.143e-52
Identity = 104/157 (66.24%), Postives = 116/157 (73.89%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P FTGLKAG+     V ++ K SAS +P+LSIKA++KDVG                  I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN VFDED IPSGVD SKISMS EDLLN  GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN
Sbjct:   12 PSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 2.037e-51
Identity = 105/161 (65.22%), Postives = 120/161 (74.53%), Query Frame = 2
Query:   89 PPFTGLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P FTGLKA      T A+++ +T     +AVP+LS+KA+LK+VG                  +EVLLGG DGSLAF+P  FSV+SGE+IVFKNNAGFPHN VFDEDEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN
Sbjct:   13 PSFTGLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 6.553e-50
Identity = 99/157 (63.06%), Postives = 116/157 (73.89%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P FTGLKA +     V ++ K SAS +P+LSIKA+LK+VG                  ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHN +FDED +PSGVDVSKISMS EDLLN  GET+ V L++KG Y+FYCSPHQGAGMVG+V VN
Sbjct:   12 PSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 8.010e-48
Identity = 96/157 (61.15%), Postives = 114/157 (72.61%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P FTGLKA    +      ++ +A A PKL++K++LK+ G                  IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHN VFDEDEIPSGVDV+KISM  +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN
Sbjct:   12 PSFTGLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.784e-47
Identity = 98/157 (62.42%), Postives = 112/157 (71.34%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P F GLKA +T      +T+K  A A P++SIKA+LKDVG                   EVLLG  DG LAFVPS  S++SGEKI FKNNAGFPHN VFDEDE+P+GVDV+KISM  EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN
Sbjct:   13 PSFAGLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.511e-46
Identity = 95/157 (60.51%), Postives = 106/157 (67.52%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            P F+GLK  A       + +  S S  P+L ++A+LKD G                  +EVLLG  DG LAFVPSS  VS+GE IVFKNNAGFPHN VFDEDEIP+GVD SKISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:   12 PSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.365e-46
Identity = 97/159 (61.01%), Postives = 110/159 (69.18%), Query Frame = 2
Query:   89 PPFTGLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 556
            P FTGLK   +      ST+  S SA    PKL++K++LKD G                  +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAGFPHN VFDEDEIPSGVD SKISM    LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV
Sbjct:   12 PSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.150e-44
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 2
Query:  263 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 559
            IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHN VFDEDEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99          
BLAST of EY660534 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.373e-44
Identity = 83/98 (84.69%), Postives = 92/98 (93.88%), Query Frame = 2
Query:  263 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 556
            IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN VFDEDE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV
Sbjct:    1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98          
The following BLAST results are available for this feature:
BLAST of EY660534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PLAS_SOLLC8.270e-5365.41Plastocyanin, chloroplastic OS=Solanum lycopersicu... [more]
PLAS1_POPNI3.143e-5266.24Plastocyanin A, chloroplastic OS=Populus nigra GN=... [more]
PLAS_SPIOL2.037e-5165.22Plastocyanin, chloroplastic OS=Spinacia oleracea G... [more]
PLAS2_POPNI6.553e-5063.06Plastocyanin B, chloroplastic OS=Populus nigra GN=... [more]
PLAS2_ARATH8.010e-4861.15Plastocyanin major isoform, chloroplastic OS=Arabi... [more]
PLAS_SILPR1.784e-4762.42Plastocyanin, chloroplastic OS=Silene pratensis GN... [more]
PLAS_PEA1.511e-4660.51Plastocyanin, chloroplastic OS=Pisum sativum GN=PE... [more]
PLAS1_ARATH3.365e-4661.01Plastocyanin minor isoform, chloroplastic OS=Arabi... [more]
PLAS2_TOBAC3.150e-4484.85Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS_RUMOB5.373e-4484.69Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660534 ID=EY660534; Name=EY660534; organism=Citrus sinensis; type=EST; length=933bp
TTCCTAAACACGCGTCCGCAAAAAGAAATTTACCAAAACCCCATTTACAG
TTACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCACCTTTCACC
GGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATGAA
GGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAAAG
ATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTAGC
AATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTGGC
TTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGAAAAGATTGTGTTCA
AGAACAATGCTGGGTTCCCACACAACTTTGTTTTCGATGAAGATGAGATT
CCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAGAAGACCTTCT
CAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACTGAAAAAGGCACTT
ACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCATGGTTGGACAAGTG
ACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCTCATCTCATGGGTT
ATTCGTCTCTTCTTTTTGCATTTTATGAGTATCATACATATTTTCATTTG
GTGAGAGACAATGTTATGTGGTGAGACACTTCAACCCAGCCAATAAACCT
CTGTATTTTCCCTTTATTTCAAATGCAGATTGGTGATGTAACTAATTTAA
AAAAAAAAAAAAGGGCGGGCCGCTCTAAGGAACCAACCTTACGCAACCTG
GCATGCAACACAAAATTCTTCCATAGGTGCCCCTAAATCTATTCACCGGG
CGGCCGATTTAAAAGCGCAGGATGGGGAAAACACGTGGTAACCCACTTAT
TCACCTTGAAAAAATCACCCTTTCCACAGAGGA
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