EY660525

Overview
NameEY660525
Unique NameEY660525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_NEUCR (Thioredoxin reductase OS=Neurospora crassa GN=cys-9 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.662e-32
Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYLVKH 720
            R+ N+  +TV FNT  V+V  + KG MS ++++ V TG+E  LEA GLFY IGH P + L++GQ+E D+ GYV+ + GT  TSVEGVFAAGDV D  +RQA+T+AG+GC+AAL  E++L +H
Sbjct:  196 RLLNHEKVTVRFNTVGVEVKGDDKGLMSHLVVKDVTTGKEETLEANGLFYAIGHDPATALVKGQLETDADGYVVTKPGTTLTSVEGVFAAGDVQDKRYRQAITSAGTGCMAALDAEKFLSEH 317          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB2_ARATH (Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.512e-27
Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQ-MSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYL 711
            R  +NP I V +N+  V+   +  G+ + G+ ++ V TG+ S L+  GLF+ IGH P ++ L GQ+ELD  GYV+ + GT KTSV GVFAAGDV D ++RQA+TAAG+GC+AAL  E YL
Sbjct:  253 RALSNPKIEVIWNSAVVEAYGDENGRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGQLELDEDGYVVTKPGTTKTSVVGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYL 372          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_PENCH (Thioredoxin reductase OS=Penicillium chrysogenum GN=TRR1 PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTK--GQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYLVK 717
            R+  +P   V FNT   +V+   K  G M+ + ++ V +  E V+EA GLFY +GH P S L++GQVELD  GY+I + GT+ T+VEGVFA GDV D  +RQA+T+AGSGC+AAL  E+++ +
Sbjct:  201 RLLAHPKCKVRFNTVATEVIGENKPNGLMTHLRVKDVLSNAEEVVEANGLFYAVGHDPASGLVKGQVELDDEGYIITKPGTSFTNVEGVFACGDVQDKRYRQAITSAGSGCVAALEAEKFIAE 323          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_RICFE (Thioredoxin reductase OS=Rickettsia felis GN=trxB PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 60/122 (49.18%), Postives = 86/122 (70.49%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQ-MSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYLVK 717
            R+F NP I+V ++    ++V + K + ++G+ ++ V T E S++   G+F  IGH+PN+ L  GQ+ +D   Y+I + GT KTSVEGVFAAGDV D  +RQAVTAAGSGC+AAL VE++L K
Sbjct:  189 RLFKNPKISVIWDHVVDEIVGSDKPKSVTGVKIQNVHTKEISLVNCSGVFIAIGHAPNTGLFTGQIAMDDDNYIITKSGTTKTSVEGVFAAGDVQDKIYRQAVTAAGSGCMAALEVEKFLNK 310          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB1_ARATH (Thioredoxin reductase 1 OS=Arabidopsis thaliana GN=NTR1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26
Identity = 59/120 (49.17%), Postives = 82/120 (68.33%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSN-TKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYL 711
            R  +NP I V +N+  V+   +  +  + G+ ++ V TG+ S L+  GLF+ IGH P ++ L G VELDS GYV+ + GT +TSV GVFAAGDV D ++RQA+TAAG+GC+AAL  E YL
Sbjct:  203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYL 322          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_CHLPN (Thioredoxin reductase OS=Chlamydia pneumoniae GN=trxB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26
Identity = 61/119 (51.26%), Postives = 82/119 (68.91%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYL 711
            R  NN  IT  +N+E V +  ++   +  + ++ V T E +  EA G+F+ IGH PN+  L GQ+ LD SGY++ E+GT+KTSV GVFAAGDV D  +RQAVT+AGSGCIAAL  ER+L
Sbjct:  194 RAQNNEKITFLWNSEIVKISGDSI--VRSVDIKNVQTQEITTREAAGVFFAIGHKPNTDFLGGQLTLDESGYIVTEKGTSKTSVPGVFAAGDVQDKYYRQAVTSAGSGCIAALDAERFL 310          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_MYCSM (Thioredoxin reductase OS=Mycobacterium smegmatis GN=trxB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26
Identity = 60/117 (51.28%), Postives = 80/117 (68.38%), Query Frame = 1
Query:  367 NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYLVK 717
            N  IT   NTE   +  + K  ++G+ LR   TGEES L+  G+F  IGH P S+L++GQVELD  GYV V+  T  TS++GVFAAGD+ DH +RQA+TAAGSGC A++  ER+L +
Sbjct:  195 NEKITFLTNTEITQIEGDPK--VTGVRLRDTVTGEESKLDVTGVFVAIGHDPRSELVRGQVELDDEGYVKVQGRTTYTSLDGVFAAGDLVDHTYRQAITAAGSGCAASIDAERWLAE 309          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_DICDI (Thioredoxin reductase OS=Dictyostelium discoideum GN=trrA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.083e-25
Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQMS--GILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYL 711
            +VF+NP I V ++T  V++    KG+ S   + +   +T   S L+A+GLFY IGH+PNS  L GQ+  D +GY+I + G+ KT+VEGVFA GDV D  +RQA+TAAG+GC+AAL  ER+L
Sbjct:  200 KVFSNPKIEVLWDTTLVEI----KGEKSVTSVGIYNSETKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIITQPGSTKTNVEGVFACGDVQDKVYRQAITAAGNGCMAALDCERFL 316          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_RICCN (Thioredoxin reductase OS=Rickettsia conorii GN=trxB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.377e-25
Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVV-SNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYLVK 717
            R+F N  I+V ++    ++V SN    ++G+ ++ V T E S+L   G+F  IGH+PN+ L  GQ+ +D   Y+I + GT +TSVEGVFAAGDV D  +RQAVTAAG+GC+AAL  E++L K
Sbjct:  189 RLFKNSKISVIWDHVVDEIVGSNKPKSVTGVKIQNVHTKEISLLNCSGVFIAIGHAPNTGLFTGQIVMDDDNYIITKSGTTRTSVEGVFAAGDVQDKIYRQAVTAAGTGCMAALEAEKFLNK 310          
BLAST of EY660525 vs. ExPASy Swiss-Prot
Match: TRXB_STRCL (Thioredoxin reductase OS=Streptomyces clavuligerus GN=trxB PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  355 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVXDHEWRQAVTAAGSGCIAALSVERYL 711
            R F +P I+  +N+E   +    K  ++G+ LR   TGE   L A GLF  +GH P ++L +GQ++LD  GY+ V   + +T++ GVFAAGDV DH +RQA+TAAG+GC AAL  ERYL
Sbjct:  190 RAFADPKISFAWNSEVATIHGEQK--LTGLTLRDTKTGETRELAATGLFIAVGHDPRTELFKGQLDLDDEGYLKVASPSTRTNLTGVFAAGDVVDHTYRQAITAAGTGCSAALDAERYL 306          
The following BLAST results are available for this feature:
BLAST of EY660525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
TRXB_NEUCR2.662e-3253.28Thioredoxin reductase OS=Neurospora crassa GN=cys-... [more]
TRXB2_ARATH1.512e-2750.00Thioredoxin reductase 2 OS=Arabidopsis thaliana GN... [more]
TRXB_PENCH1.975e-2747.97Thioredoxin reductase OS=Penicillium chrysogenum G... [more]
TRXB_RICFE1.280e-2649.18Thioredoxin reductase OS=Rickettsia felis GN=trxB ... [more]
TRXB1_ARATH2.183e-2649.17Thioredoxin reductase 1 OS=Arabidopsis thaliana GN... [more]
TRXB_CHLPN2.851e-2651.26Thioredoxin reductase OS=Chlamydia pneumoniae GN=t... [more]
TRXB_MYCSM3.724e-2651.28Thioredoxin reductase OS=Mycobacterium smegmatis G... [more]
TRXB_DICDI1.083e-2549.59Thioredoxin reductase OS=Dictyostelium discoideum ... [more]
TRXB_RICCN5.377e-2547.54Thioredoxin reductase OS=Rickettsia conorii GN=trx... [more]
TRXB_STRCL7.023e-2547.06Thioredoxin reductase OS=Streptomyces clavuligerus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660525 ID=EY660525; Name=EY660525; organism=Citrus sinensis; type=EST; length=903bp
TTTTTATTAGCATATTTTATATGATCTTTCTGCCAAGTTGTGGTTGAATT
TTTACTAATTGTGACTCCAAAGTGCTTCCGTGATCCTTTTCTGTGATAGC
AGCTTATGGTTTCACAATACTAGGCTACTAGGTGGATTGCTTATCTAACA
GTTGAAGCGTCATGTTGTTTTTCATATATTTTTTCATTGATTACTCTTGT
TATGGCATTTCTTGTTGCTCTATGGTGTGTAAATTCTCCTTTTTGTTTCT
AGTTGGCTGCCTTGACGATGAATTATGTACTAATGAAAATTTTCTATGTT
GAGTTTTCAACTCCCTGAATGTTTGTTTAACAGGTTGGTTATCGCGAATG
TTTCAGAGTGTTCAACAACCCAAATATCACTGTGCACTTCAATACGGAGA
CAGTTGATGTTGTCAGCAATACAAAAGGCCAAATGTCCGGCATTTTACTT
AGAAAAGTTGACACTGGTGAGGAATCTGTGCTAGAGGCAAAAGGCTTATT
TTATGGTATAGGTCATTCACCGAATAGCCAGTTGCTGCAAGGCCAAGTTG
AACTTGACAGCTCAGGTTATGTGATTGTTGAGGAGGGTACTGCAAAAACT
TCTGTTGAAGGTGTATTTGCAGCTGGAGATGTGCANGACCACGAGTGGAG
ACAAGCAGTAACTGCTGCTGGATCAGGATGCATTGCTGCTTTGTCAGTGG
AGAGATACCTTGTGAAACATATCTCCNTATTGAGTTTCATCAGCCTCAAG
CTGAAGAGCCTAAGAAGGACCTTACAGATAGAGATGTTCAAGAAAGGTTT
GACATCACATGTACAAAGACAAGGGCCAGTATGCTCTACGAAAGTTGTCA
CATGAAAGCCCAAGGCTATAGTGTACTATAACTTCCCCAACTTGGGTCCT
TGA
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