EY660517

Overview
NameEY660517
Unique NameEY660517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 3.363e-51
Identity = 93/137 (67.88%), Postives = 108/137 (78.83%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSITNANGAKDTPKRKDPE 442
            M R PCC+K GLKKG WTPEED+ L+A++ ++G+ NWR LPK AGL RCGKSCRLRW+NYLRP+IKRGN++KEEEDTII LHE LGNRWSAIAA+LPGRTDNEIKN WHT LKKRL   +      A    K K P+
Sbjct:    1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPAQGGHVAASGGKKHKKPK 137          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.477e-46
Identity = 84/132 (63.64%), Postives = 102/132 (77.27%), Query Frame = 2
Query:   38 RTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSITNA---NGAKDTP 424
            R PCC K GL +G+WTP+ED +LIAY+ K+G+ NWR LPK AGL RCGKSCRLRW+NYLRP++KRGN+T EEE+ IIRLH  LGN+WS IAA LPGRTDNEIKN W+T LKK++ +     A   +G   TP
Sbjct:    5 RAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKKKAGAGSGDAGTP 136          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.976e-43
Identity = 77/125 (61.60%), Postives = 94/125 (75.20%), Query Frame = 2
Query:   20 KEIKMVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSI 394
            K +    TPCC K G+K+G WT EED  L++++ K G   WR LPK AGL RCGKSCRLRWMNYLRP++KRG  T +EED I+RLH  LGNRWS IA ++PGRTDNEIKN+W+T L+K+L R  I
Sbjct:    8 KPVSKKTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQGI 132          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.976e-43
Identity = 79/122 (64.75%), Postives = 96/122 (78.69%), Query Frame = 2
Query:   32 MVRTPCCDKT-GLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSI 394
            M R+PCCD+  G+KKG W PEED KL AY+ + GY NWR LPK AGL RCGKSCRLRWMNYLRP+I+RG ++  EE TI+RLH  LGN+WS IA  LPGRTDNEIKN+W+T ++K+L +  I
Sbjct:    1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQMGI 122          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.581e-43
Identity = 83/146 (56.85%), Postives = 107/146 (73.29%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSI-TNANGAKDTPKRKDPEIYNHDDTE 466
            M R PCC+K GL++G WT EED+KL++++T  G   WR +PK AGL RCGKSCRLRW NYLRP++KRG +++ EE+ I+ LH +LGNRWS IAAQLPGRTDNEIKN+W+T LKKRL+   +  N +   +  K  D E    DDT+
Sbjct:    1 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQGLDPNTHLPLEDSKLDDTE----DDTD 142          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.371e-43
Identity = 82/152 (53.95%), Postives = 106/152 (69.74%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSITNANGAKDTPKRKDPEIYNHDDTEANPEQES 487
            M R PCCDK G+KKG WT EED+KLI+++   G   WR +PK AGL RCGKSCRLRW NYLRP++KRG  +  EE  +I LH  LGNRWS IAA+LPGRTDNEIKNHW+T +KK+L +  I   +     P +K+  + +   TE++  +E+
Sbjct:    1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGI---DPVTHEPLKKEANLSDQPTTESDQNKEN 149          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.749e-43
Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSITNANGAKDT 421
            M RTPCC+K GLK+G WT EED+ L  Y+ ++G  +WR LPK AGL RCGKSCRLRW+NYLR ++KRGN +KEEED II+LH +LGNRWS IA+ LPGRTDNEIKN+W++ L +++         G  DT
Sbjct:    1 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYRRKYTAGPDDT 130          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.749e-43
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKR-----------NSITNANGAKDTPKRKDP 439
            M R+PCC+K    KG WT EED KLI+Y+  +G   WR LP+ AGL RCGKSCRLRW+NYLRP++KRGN+T EE+D II+LH  LGN+WS IA +LPGRTDNEIKN+W+T +K++L R           N    +  + D+ K +DP
Sbjct:    1 MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKGIDPATHRPINETKTSQDSSDSSKTEDP 147          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.281e-42
Identity = 74/121 (61.16%), Postives = 96/121 (79.34%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSI 394
            M R+PCC+K  + KG WT EED+ L+ Y+ K+G   WR LP+ AGL RCGKSCRLRWMNYLRP++KRGN+T+EE++ II+LH  LGN+WS IA +LPGRTDNEIKN+W+T +K++L    I
Sbjct:    1 MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRGI 121          
BLAST of EY660517 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.727e-42
Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 2
Query:   32 MVRTPCCDKTGLKKGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYLRPNIKRGNYTKEEEDTIIRLHESLGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRLKRNSI 394
            M R+PCC+K    KG WT EED +L+AY+  +G   WR LPK AGL RCGKSCRLRW+NYLRP++KRGN+T+EE++ II+LH  LGN+WS IA +LPGRTDNEIKN+W+T ++++L    I
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRGI 121          
The following BLAST results are available for this feature:
BLAST of EY660517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB4_ORYSJ3.363e-5167.88Myb-related protein Myb4 OS=Oryza sativa subsp. ja... [more]
MYB1_MAIZE9.477e-4663.64Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB5_ARATH1.976e-4361.60Transcription repressor MYB5 OS=Arabidopsis thalia... [more]
MYB39_ARATH1.976e-4364.75Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYB2_PHYPA2.581e-4356.85Myb-related protein Pp2 OS=Physcomitrella patens G... [more]
ODO1_PETHY3.371e-4353.95Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 S... [more]
MYBP_MAIZE5.749e-4360.00Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
MYB32_ARATH5.749e-4354.42Transcription factor MYB32 OS=Arabidopsis thaliana... [more]
MYB3_ARATH1.281e-4261.16Transcription factor MYB3 OS=Arabidopsis thaliana ... [more]
MYB4_ARATH3.727e-4260.33Transcription repressor MYB4 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-A10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660517 ID=EY660517; Name=EY660517; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGAAAATTGAAAGGAGATCAAGATGGTGAGGACACCTTGCT
GTGATAAAACAGGACTGAAGAAGGGAACATGGACACCTGAAGAAGATAGA
AAGCTAATAGCTTATGTGACTAAGTATGGCTACTGGAACTGGCGCCAGCT
TCCTAAGTATGCAGGTCTAGCAAGGTGTGGGAAGAGCTGCAGATTGAGGT
GGATGAATTACTTGAGGCCTAATATCAAAAGAGGGAATTACACCAAAGAA
GAAGAAGATACAATCATCAGACTACACGAGTCACTGGGAAATAGATGGTC
CGCGATTGCTGCCCAGTTACCGGGAAGAACTGACAATGAGATCAAAAACC
ACTGGCACACAAGCCTCAAGAAACGCTTGAAACGAAATTCAATCACCAAT
GCTAATGGAGCCAAAGATACCCCAAAACGAAAAGATCCTGAAATATACAA
TCATGATGACACTGAAGCCAACCCAGAGCAAGAATCAAATCTTGTTGACA
TTATTCCTCCAATTCTTGAAAGCTCTTCTTCATCAAGTGACCAGATTTCC
TCCTTGTCCATGACCACAGATATTACCTCAGTTGGAAAAAATACAAATAC
CATTGATGAGTTGATTCTTGACAATAATAATGAGGTTGTTTTTCATCCAT
ATGCGGACACCAGTGGAAGTTTCTGGACCGAGCCGNTCTATTCTGATAAT
TTCTANCATTTATATATTTCCCATGATTTTCAAGCACCCAGCTTGNTGCC
NGCCGATCCTGGATTTGCATCTGTTCACTCCCCCATTCTTGATGGAGAAA
TATCTTATGGCCTTAGAAAGTGTATTATTTAATTGGATATCGACTACTCT
ACTGTCTNCTGAGATATATATATATATATTTTTATATATATAGGTATTCC
ATTTCAA
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