EY660513

Overview
NameEY660513
Unique NameEY660513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660513 vs. ExPASy Swiss-Prot
Match: GID2_ARATH (F-box protein GID2 OS=Arabidopsis thaliana GN=GID2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.381e-12
Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 3 
Query:    3 LFEVLKHADTRTSXXXXXXXXXXXXDTQNEHLWKLICTHHFANVGCATQ*LRSVVLALVGSRRLHSLYL 209
            ++EVLKH D +T               Q+E LW+LICT H+ N+GC    LRSVVLAL G RRLHSLYL
Sbjct:   40 VYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYL 108
The following BLAST results are available for this feature:
BLAST of EY660513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GID2_ARATH1.381e-1252.17F-box protein GID2 OS=Arabidopsis thaliana GN=GID2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-023-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660513 ID=EY660513; Name=EY660513; organism=Citrus sinensis; type=EST; length=908bp
CCCTGTTCGAGGTGTTGAAACACGCGGACACCAGGACTTCGTTGCAGGCT
GCCTTGCGTCAACAAGCTATGGCACAAGACACTCAAAATGAGCACCTTTG
GAAGTTAATTTGCACCCACCACTTCGCTAACGTTGGGTGCGCTACCCAAT
AGCTCAGATCTGTTGTCCTGGCTCTCGTTGGCTCCCGTCGCCTTCACTCC
CTCTATCTCGGTGGCTGCCGTCGCTTTCTCTCTCTGCCATTCTTTCTCTC
ACAGTCGAAACCAAAACTCAAATCCCTAACTCCCCGGCCACAAAACCTCT
CATTTGCCTCAAAACAAAACAAAATCAATCTGTACTCCTTCTCTCTGATT
ATTCGAAAGTTAGAAGCACCTTAAATAGTTCTCTCTGAAAAGCCATTCAC
CCAAACCCTAACCTCACTAATAAAATTTTGATTAATAGTGATTTTTTCAA
TTAATTAAGATATGGGTTCATTGGCAGAGAAACAAAGAGACTTCGCCCTG
TGGTATCCACTTTGAGAAACTACTCATCTGCAACTAAACGGGAAAATTCC
AAGGGATTTGACAGAGGCATCACTATCTGGTGCAGGATTATCCATAATAG
CAGCCCTTTCTATGTTGTTTTTATTTGGAATGGACCTGATTTAGACCCAC
TGGTTCTGAATTCCACTCAATGCTTTGTATACATTCGCTTAAGCATGGGA
GAGAAGCTGACGATGATTCTGNTGAANGGTCTCATGTGCTAACTGGCAAT
AATTTTGATAGTTATTCACATGAGTATCCTATTTTAGCTGTCAATTTTAT
GATCCATGGGGCTACTGGAGTAATGCCTGGNATTTTATTTTCCCCTTTTG
NTCCCCAATTTGGCCTGTTGCTTTTTGACACTGGGGCCAAAATTACCTTA
TGGATTAT
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