EY660504

Overview
NameEY660504
Unique NameEY660504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660504 vs. ExPASy Swiss-Prot
Match: YZ37_SYNY3 (Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803) GN=slr0537 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20
Identity = 66/226 (29.20%), Postives = 105/226 (46.46%), Query Frame = 3 
Query:  117 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCS--EPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPDTIRTIYKACEVAHRSGALVAVTASDVTCIERHYDDFWEXVGNYADIVFANRTK 788
            ++DV G+G A+VD    V  + L  LG++KG   LV       ++  +     K ++GGS +N+LV+LA+LGG               VG D  G FY   L    +      E   +G TG  +V  TPDA R M A+ G S +++      + + ++    +EGYL   P       +A  +A +SG    ++ SD    +   D   E +G+  D++FAN  +
Sbjct:    4 KYDVYGMGNALVDMEFEVTPEQLASLGIDKGVMTLVEEARENELIAQLAQQRGKQSSGGSAANTLVSLAQLGGTGF--------YACKVGKDEAGAFYLQDLNDCGLDTNPHHETAGEGITGKCLVFVTPDADRTMNAFLGISGSLSVTEMDWSALKQSQYLYLEGYLVTSPSAKAACIEAKAIAEQSGVKTCLSLSDPNMAKFFQDGLKEMLGSGVDLLFANEAE 221
The following BLAST results are available for this feature:
BLAST of EY660504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YZ37_SYNY31.326e-2029.20Uncharacterized sugar kinase slr0537 OS=Synechocys... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660504 ID=EY660504; Name=EY660504; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGATAATTATGAGGAAGATGATGAAGCTGGAGATGAGAGC
GAGGCTGATGATGATGGAGACGAATATGATGAAGAGATCAGTGGGTCTGC
TTCTGTCTTGCCTGAGAGATGGGATGTCTTAGGCCTGGGCCAGGCTATGG
TAGATTTTTCTGGCATGGTTGACGATGATTTTTTGGAGAGACTGGGATTA
GAGAAGGGAACGAGGAAGCTTGTAAATCATGAAGAGAGGGGCAGGGTTTT
GCGTGCTATGGATGGTTGCAGCTATAAGGCTGCTGCTGGTGGATCTCTTT
CCAACAGTCTGGTGGCCTTGGCAAGGCTTGGGGGAAAGCCCATTGGTGGC
CCAGCTTTAAATGTAGCCATGACGGGCAGCGTCGGGAGCGATCCATTGGG
TGGCTTCTACAGGGCAAAATTGCGTCGGGCGAATGTGGCATTTTGCTCTG
AACCCATCAAGGACGGCACAACAGGAACAGTGATAGTTCTCACTACTCCA
GATGCTCAACGCGCGATGCTTGCATACCAGGGTACATCATCGACTATCAA
CTATGATCCCTGCTTGGTTAACCTTATTTCCAAGACAAATATATTTATTG
TTGAAGGCTATTTGTTTGAACTTCCTGATACAATTAGAACAATTTACAAA
GCTTGTGAAGTAGCTCACAGAAGTGGCGCTCTGGTTGCAGTCACAGCATC
AGATGTGACGTGCATTGAGAGACATTATGATGACTTCTGGGAAATNGTTG
GAAACTATGCCGACATCGTGTTTGCAAACAGGACGAAGCCAGAGCTTTTT
GCACTTCTCCTCAAAGAAACCCCGAGTCCACCACAAGGACTTAAGCCCCT
TGGTTCTTTAGTTCCAGCCAGATGGGGAAGGAGCTCCT
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