EY660489

Overview
NameEY660489
Unique NameEY660489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 2.929e-102
Identity = 183/230 (79.57%), Postives = 210/230 (91.30%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            G+KKG+LFLADVNTQLKNKN+TTD+KVDT SNLFTTITVDE APGLKTILSF+VPDQRSGK+E+QYLHDYAGI TSVGLTANPIVNFS V+GTN+++LGTD+SFD+K+G+FTKCNAGLSF NADL+ASLNLNNKGD+L ASYYH V+PL  TAVGAEV HSFST +N ITVGTQH LDPLT++KAR+NN G ASAL+QHEWRPKSL T+SG VDTK+++K AK GLAL L
Sbjct:   45 GSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALAL 274          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 2.172e-97
Identity = 176/230 (76.52%), Postives = 208/230 (90.43%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            G KKGELFLADV+TQLKNKNITTD+KVDT SN++TTITVDEPAPGLKTI SF VPDQ+SGKVELQYLH+YAGI+TS+GLTA+P+VNFS V G N ++LGTDLSFD+ +GNFTKCNAGLSF+++DLIASL LN+KGD+++ASYYH V P+  TAVGAE+ HSFS+ +NT+T+GTQH+LDPLTT+KARVN+ G ASALIQHEWRPKSL TISG VDT+AIEKSAK GLA+ L
Sbjct:   45 GLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVAL 274          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 3.589e-92
Identity = 172/230 (74.78%), Postives = 193/230 (83.91%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            GTKKGELFL DVNTQLKNKNITTD+KVDT SNLFTTITV+EPAPG+K ILSFKVP+Q SGKVELQYLH+YAGIS+SVGL ANPIVNFS+VIGTN L+ G D+SFD+K G  TK NA ++F   DLI SL LN KGD L+ASYYH +NPL  TAVG ++ H FST +NT T+GTQH LDPLTT+K RV N+G ASALIQHEWRPKSL TIS  VDTKAIEKSAK GL+L L
Sbjct:   45 GTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLAL 274          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3)

HSP 1 Score: 328.176 bits (840), Expect = 3.714e-89
Identity = 170/230 (73.91%), Postives = 191/230 (83.04%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            GTKKG+L L DV  Q + KNITTDLKV T S    T TVDE APGL++I SFKVPDQ SGKVELQYLH+YAGISTS+GLT NP VNFS VIG+NVL++GTD+SFD+KSGNFTK NAGLSF   DLIASL +N+KGD L ASYYH VNPL  TAVGAEV H  S+ D+TITVGTQH LDPLT++KARVN+AGIASALIQHEW+PKS  TISG VDTK+I+KSAK GLAL L
Sbjct:   45 GTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALAL 274          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3)

HSP 1 Score: 312.383 bits (799), Expect = 2.109e-84
Identity = 153/228 (67.11%), Postives = 183/228 (80.26%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            GT KG LFL DV TQ+KN N T D+KV T S+L TT+T DEPAPGLK I+  K+PD +SGK E+QY HDYAGISTSVG TA PIVNFS V+GTN LSLGTD++++++SGNF   NAG +F   DL ASL LN+KG+ L ASYY  V+P T VGAE+ H+F+T +N ITVGTQH LDPLTT+KARVNNAG+A+ALIQHEWRPKS  T+SG VD+KAI+KSAK G+AL L
Sbjct:   45 GTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALAL 272          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 308.145 bits (788), Expect = 3.977e-83
Identity = 151/228 (66.23%), Postives = 186/228 (81.58%), Query Frame = 3
Query:    6 TKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVN-PLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            TKK +L   ++ +Q+KNKNIT D+K ++ SN+ TT+TVDE  PGLK+ILSF VPDQRSGK ELQY HDYAG+S S+GLTA+P+VN S+V GT  L++G D+S D+ +GN TK NAGLSF+N DLIASLNLNNKGDSL ASYYH VN   TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR NN+G ASAL+QHEWRPKS+ TIS  VDTKAI+KS+K G+A+ L
Sbjct:   45 TKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVAL 272          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.415e-80
Identity = 151/229 (65.94%), Postives = 185/229 (80.79%), Query Frame = 3
Query:    6 TKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL-TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXL 686
            TKK +L + ++ +Q+KNKNIT D+K ++ASN+ TTIT D+  APGLKTILSF VPDQ+SGKVELQYLHDYAGI+ S+GLTANP+VN S   GT+ L++G D+S D+ + NF K NA LS+ N DLIASLNLNNKGDSL ASYYH V    TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR+NN+G ASALIQHE+ PKSL TIS  VDTKAIEKS+K G+A+ L
Sbjct:   45 TKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIAL 273          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.731e-73
Identity = 138/233 (59.23%), Postives = 176/233 (75.54%), Query Frame = 3
Query:    3 GTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFV--NPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSAKXGLALXLSH 692
            GT+K E    +++TQ+KNK +T D+K ++ S+L TTITVDE   PGLK+I++  VPDQRSGK+E QYLH+YAG++ SVGL +NP+VN S   G+  LS+G D+SFD+ + +FTK NA LS  + DLIASL+LNN GD+L ASYYH V  +  TAVGAE+ HS S  ++T+  G+QH LDP TT+K R NN G+ASAL+QHEWRPKS  TISG VDTKAIEKS K GL+L L H
Sbjct:   45 GTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLKH 277          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC_DROME (Voltage-dependent anion-selective channel OS=Drosophila melanogaster GN=porin PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 57/220 (25.91%), Postives = 100/220 (45.45%), Query Frame = 3
Query:   45 QLKNKNITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVPDQ---RSGKVELQYLHDYAGISTSVGLTAN-PIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSA-KXGLALXL 686
            ++K+  +T   K +T + LFT + V D+   GLK  L      Q   ++GK ++ Y H+     + V +    P++N SAV+G      G   +FD++    T  N  L +   D +    +N+ G   + S +   +    VG ++  +  T++    +G ++ LD   +++A+VNNA       Q + R     T+S  VD K       K G+ L L
Sbjct:   62 KVKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLVDGKNFNAGGHKIGVGLEL 280          
BLAST of EY660489 vs. ExPASy Swiss-Prot
Match: VDAC2_XENLA (Voltage-dependent anion-selective channel protein 2 OS=Xenopus laevis GN=vdac2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 64/231 (27.71%), Postives = 96/231 (41.56%), Query Frame = 3
Query:   36 VNTQLKNK------NITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLXTISG*VDTKAIEKSA-KXGLALXL 686
            VN  L+ K       +T   K +T + L T I + D+ A GLK  L+F         ++SGKV+  Y  +Y  +   V    A P ++ SAV+G      G  ++FDS     TK N  + +   D     N+N+ G   A S Y  V+        +  +         +  ++ LD    + A+VNN+ +         RP    T+S  VD K I     K GL L L
Sbjct:   53 VNGSLETKYKWGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLK--LTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVND-GSEFAGSIYQKVSDKMETAVNLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNNSSLVGVGYTQTLRPGVKLTLSALVDGKNINAGGHKLGLGLEL 280          
The following BLAST results are available for this feature:
BLAST of EY660489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VDAC1_SOLTU2.929e-10279.57Mitochondrial outer membrane protein porin of 34 k... [more]
VDAC2_SOLTU2.172e-9776.52Mitochondrial outer membrane protein porin of 36 k... [more]
VDAC_PEA3.589e-9274.78Outer plastidial membrane protein porin OS=Pisum s... [more]
VDAC1_ARATH3.714e-8973.91Mitochondrial outer membrane protein porin 1 OS=Ar... [more]
VDAC2_ARATH2.109e-8467.11Mitochondrial outer membrane protein porin 2 OS=Ar... [more]
VDAC1_ORYSJ3.977e-8366.23Mitochondrial outer membrane protein porin OS=Oryz... [more]
VDAC1_WHEAT1.415e-8065.94Mitochondrial outer membrane porin OS=Triticum aes... [more]
VDAC_MAIZE3.731e-7359.23Outer plastidial membrane protein porin OS=Zea may... [more]
VDAC_DROME4.797e-1225.91Voltage-dependent anion-selective channel OS=Droso... [more]
VDAC2_XENLA1.396e-1127.71Voltage-dependent anion-selective channel protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660489 ID=EY660489; Name=EY660489; organism=Citrus sinensis; type=EST; length=861bp
CTGGAACGAAAAAGGGTGAGCTGTTTCTAGCTGATGTTAATACCCAGCTG
AAGAACAAGAATATCACAACTGATCTCAAAGTGGACACTGCCTCCAATCT
TTTCACAACTATCACTGTTGATGAACCTGCTCCTGGGCTGAAAACGATCC
TAAGCTTCAAAGTTCCAGATCAAAGGTCTGGCAAGGTTGAACTCCAGTAT
TTGCATGATTATGCGGGGATAAGCACAAGTGTCGGCTTAACAGCGAATCC
TATTGTTAACTTCTCGGCTGTGATTGGTACTAATGTTCTCTCTCTTGGTA
CTGATCTGTCATTTGACTCCAAATCTGGGAACTTCACTAAATGCAATGCT
GGTCTGAGCTTCAACAATGCCGACCTTATTGCTTCATTGAATTTGAACAA
CAAAGGTGATTCCCTGGCTGCATCCTACTACCACTTTGTTAATCCCTTGA
CAGCTGTTGGTGCAGAAGTAATCCATAGCTTCTCAACCACTGACAATACC
ATCACTGTTGGGACCCAGCACATATTAGATCCACTGACCACATTGAAGGC
GCGAGTGAACAATGCTGGCATTGCTAGTGCTCTCATCCAGCATGAGTGGC
GTCCAAAGTCGTTGNTCACCATTTCTGGGTGAGTGGACACCAAGGCCATT
GAGAAGAGTGCCAAATTNGGACTGGCATTGNCTCTAAGCCATAGTTGAGA
GCTTGGTAGGTGTGGTAGGCATAGTTTAGCTGTCTGTCCAAAACTGATAT
GGGTTTTGTTTATCTCCTCTCGGGGTTTTGATTGGAAATAAAATTGGAGA
TCCTAACCTGTGCCATACTTTTGAAGGCTTTACATTTCAATTAACCTTTG
ACTGAGGTTAA
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