EY660487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.786e-27 Identity = 65/168 (38.69%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRVN 576 LE P++ + F+ + EE F+ANDW+T+L+PCYL +Y+P G+Y AKVAFC + F + F + + + K IL SD V VSP+YAQE++SG ++G+ELDN IR GI GI+NG+ QE N +TDKYI ++ Sbjct: 205 LEAPRVLNLNSSKNFSGPYGEEV-AFIANDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWM-KAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIH 370 HSP 2 Score: 31.5722 bits (70), Expect = 6.786e-27 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 576 YDASTVMDAKPLRKEPSKENLG 641 YDA+TVMDAKPL KE + +G Sbjct: 371 YDATTVMDAKPLLKEALQAEVG 392
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.277e-26 Identity = 68/168 (40.48%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRVN 576 LE P++ + F+ + E+ +FVANDW+T+L+PCYL +MY+ KGMY AKVAFC + F + F + + + + K IL SD V VSP+YA ELVSG +KG+ELDN+I I GIVNG+ QE N TDK+I N Sbjct: 205 LEAPRVLNLTSSKYFSGPYGEDV-VFVANDWHTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWM-KAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGMDTQEWNPATDKHIDTN 370 HSP 2 Score: 28.8758 bits (63), Expect = 7.277e-26 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 576 YDASTVMDAKPLRKEPSKENLG 641 YD +TVMDAKPL KE + +G Sbjct: 371 YDITTVMDAKPLLKEALQAAVG 392
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.385e-26 Identity = 72/168 (42.86%), Postives = 97/168 (57.74%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRVN 576 LE P++ + F+ + E+ IFVANDW+++LIPCYL +MYK +G+Y AKVAFC + F + F E K K IL SD VF VSPHYA+EL+SG+D+G+ELDNIIR+ GI GIVNG+ +E + TD+YI V+ Sbjct: 200 LEAPRVLNLNSSKYFSGPYGEDV-IFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWM-KAGILESDQVFTVSPHYAKELISGEDRGVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVH 365
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.086e-23 Identity = 66/167 (39.52%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRV 573 LE PK+ F+ + E+ +F+ANDW+T+LIPCYL +MY+ +G+Y AKVAFC + F + F + + + K IL S V VSP+YAQELVS DKG+ELD+++R I GIVNG+ QE N TDKY V Sbjct: 204 LEAPKVLNLNSSNYFSGPYGEDV-LFIANDWHTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWM-KAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMDTQEWNPATDKYTDV 368 HSP 2 Score: 29.261 bits (64), Expect = 1.086e-23 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 573 QYDASTVMDAKPLRKEPSKENLG 641 +YD +TVMDAKPL KE + +G Sbjct: 369 KYDITTVMDAKPLLKEALQAAVG 391
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.112e-23 Identity = 67/173 (38.73%), Postives = 91/173 (52.60%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*------KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRV 573 LE P++ F+ + E+ +FVANDW+T+L+PCYL TMY+ +G+Y AKVAFC + F + F + + P++ K I +D VF VSP+YA+ELVS KG+ELDN IR GI GI NG+ QE N TDKY+ V Sbjct: 205 LEAPRVLNLNSSNYFSGPYGEDV-VFVANDWHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFI-------DGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNGMDTQEWNPATDKYLAV 369 HSP 2 Score: 26.9498 bits (58), Expect = 3.112e-23 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 573 QYDASTVMDAKPLRKEPSKENLG 641 +YD +TVM AKPL KE + +G Sbjct: 370 KYDITTVMQAKPLLKEALQAAVG 392
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.239e-21 Identity = 59/167 (35.33%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRV 573 LE P++ + F+ + E+ +FVANDW+T+L+PCYL +MY+ +G+Y AKV FC + + S + F + + + K IL + V VSP+YAQEL+SG D+G+EL +R + GI+NG+ QE N TDKYI + Sbjct: 207 LEAPQVLNLNSSKYFSGPYGEDV-VFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWM-KAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDI 371 HSP 2 Score: 26.5646 bits (57), Expect = 1.239e-21 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 573 QYDASTVMDAKPLRKEPSKENLG 641 +YD +TV DAKPL KE + +G Sbjct: 372 KYDITTVTDAKPLIKEALQAAVG 394
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.194e-21 Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GF-WTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIK-GIVNGLHAQERNSLTDKYIRV 573 LE P++ + F+ + EN +FVANDW+T+++PCYL +MYK G+Y AKVAFC + F + P S + + ++ RK + + K I DVV VSPHY +EL SG +KG+ELD ++RT ++ GIVNG+ + N TDKYI V Sbjct: 161 LEAPRVLNLNNSEYFSGPY-GENVVFVANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWM--KAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVIDWNPATDKYISV 326
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19 Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 136 ENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRVN 576 E+ +FV NDW+T L+ CYL + Y+ G+Y AKVAFC + F + F E + K IL +D V VSP+YA+EL+SG+ +G ELDNI+R GI GIVNG+ E + + DK++ VN Sbjct: 231 EDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWM-KAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPIKDKFLTVN 376
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19 Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 73 LETPKIHES*QKQIFTLDHMEENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYIRVN 576 LE P+I F+ + E+ +FV NDW+T L+ CYL + Y+ G+Y AKVAFC + F + F E + K IL +D V VSP+YA+EL+SG+ +G ELDNI+R GI GIVNG+ E + DK++ VN Sbjct: 199 LEAPRILNLNNNPYFSGPYGEDV-VFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWM-KAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVN 364
BLAST of EY660487 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18 Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 136 ENDIFVANDWNTSLIPCYLTTMYKPKGMYNCAKVAFCYPQYCLPKKICI*GFWTSQPSSSIQKLF*LY*WIQ*TWERKNSPLR*KLRIL*SDVVFPVSPHYAQELVSGQDKGLELDNIIRTPGIKGIVNGLHAQERNSLTDKYI 567 E+ +FV NDW+T +P YL Y+P G+Y AKVAFC + + S + F E + K IL SD V VSP+YA+EL+SG +G ELDNI+R GI GIVNG+ E + DKYI Sbjct: 223 EDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGRKINWM-KAGILESDRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYI 365 HSP 2 Score: 75.0998 bits (183), Expect = 5.490e-13 Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 86 KFMNLNRNKYLLWTIWKKMTFLL--LMTGILPLSLVT*LLCISPKGCTIVPKLLFVIHNIAYQRRFAFEDFGLLNLPAQFKSSFDFIDGYNKPGRGR 370 + +NLN N Y T + + F+ TG LP L P G K+ F IHNI+YQ RFAFED+ LNL +FKSSFDFIDGY+ P GR Sbjct: 207 RILNLNNNPYFKGTYGEDVVFVCNDWHTGPLPSYLKN---NYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGR 300 The following BLAST results are available for this feature:
BLAST of EY660487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660487 ID=EY660487; Name=EY660487; organism=Citrus sinensis; type=EST; length=839bpback to top |