EY660486

Overview
NameEY660486
Unique NameEY660486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.536e-88
Identity = 142/227 (62.56%), Postives = 175/227 (77.09%), Query Frame = 2
Query:   17 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELEGLL 697
            K WRFD++ LP DL+KRG+A ED  A HG++LTI DYPFA DGL LW  +K+WVTDYV HYYPD+ L+ SD+ELQ WW+E+R +GH DKKDEPWWPVLKT  +LI ++TTI WV SGHHAAVNFGQY Y  YFPNRPT  R+ MP EDPT++  K F E PE  LL T+P+  QA LV+ TLDLLSTHSPDEE++G+ +E +W  +PVINAAF +  G+   LEG++
Sbjct:  628 KLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVI 854          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.648e-74
Identity = 127/225 (56.44%), Postives = 166/225 (73.78%), Query Frame = 2
Query:   23 WRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELEGLL 697
            W+F+ +ALP+DL+ RG+AV   +    L+L I DYP+A DGL +WG +KQW +DYV+ YY     V  D+EL+AWW E+RT GHADKKDEPWWPV  T +NL++ILT I+WV SGHHAAVNFGQY YA YFPNRPT+ R N+P E+  +   K F+ +PE+ LL + P+  QAI V+ATLD+LS+HSPDEE++G+  EPAW  +P++ AAF K SGR  E EG +
Sbjct:  632 WQFNTEALPEDLINRGLAVRRDDGE--LELAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTI 854          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 9.045e-73
Identity = 125/229 (54.59%), Postives = 161/229 (70.31%), Query Frame = 2
Query:   14 DKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTE-KFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELEGLL 697
            DK WRFD +ALP DL++RGMA EDP A HGL+L I+DYPFA DGL +W  +K WV  YV  +YPD   V  D+ELQA+WTE+RT GH DKKD PWWP L +P++L   LTTI+WVA+ HHAAVNFGQY +  YFPNRP+IAR  MP E+P +    + F++ P+ AL   FP+  QA +V+A LD+LSTHS DEE+LG  +   W  D  + AA+   + R  E+EG++
Sbjct:  671 DKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVI 899          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 9.045e-73
Identity = 125/229 (54.59%), Postives = 161/229 (70.31%), Query Frame = 2
Query:   14 DKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTE-KFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELEGLL 697
            DK WRFD +ALP DL++RGMA EDP A HGLKL I+DYPFA DGL +W  +K WV  YV  +YPD   V  D+ELQA+WTE+RT GH DKKD PWWP L +P++L   LTTI+WVA+ HHAAVNFGQY +  YFPNRP+IAR  MP E+P +    + F++ P+ AL   FP+  QA +V+A LD+LS+HS DEE+LG  +   W  D  + AA+   + R  E+EG++
Sbjct:  654 DKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVI 882          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.874e-72
Identity = 127/214 (59.35%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   14 DKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAF 655
            D+QWRFD +ALP+DL++RGMAV +PN    L+L I+DYP+A DGL +W  +KQW   YV HYYP  + +  D+ELQAWWTE+RT GHADK+DEPWWP L + +NL + L TI+WV SGHHAAVNFGQY  A Y PNRPT+AR NMP E   +   + F+E PE  LL TFP+  Q+ +V+A LDLLSTHS DEE++G  +EPAW +D VIN AF
Sbjct:  660 DQQWRFDMEALPEDLIRRGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDM-RDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAF 870          

HSP 2 Score: 21.557 bits (44), Expect = 1.874e-72
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  729 RNGAGVVPYI 758
            R+GAG+VPY+
Sbjct:  896 RHGAGMVPYV 905          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.190e-65
Identity = 117/217 (53.92%), Postives = 153/217 (70.51%), Query Frame = 2
Query:    5 ASDDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAF 655
            A+ DKQWRFD +ALP+DL++RGMAV   + +  L+L I+DYP+A DGL +W  +KQW +DYV HYYP    +  D+ELQ WWTE+RT GH DK+DEPWWP L   ++L+++L TI+WV S HHAAVNFGQY  A Y PN P+IAR NMP E   E+    F   PE   L T P+  Q ++V+ATLDLLS+H+ DEE++G  +EPAW  D  ++ AF
Sbjct:  658 AAYDKQWRFDMEALPEDLIRRGMAVRGEDGK--LELAIEDYPYANDGLLVWDAIKQWASDYVAHYYPCAVDIVDDEELQDWWTEVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEM-LAFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAF 871          

HSP 2 Score: 22.7126 bits (47), Expect = 1.190e-65
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  729 RNGAGVVPYI 758
            R+GAGVVPY+
Sbjct:  897 RHGAGVVPYV 906          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.497e-63
Identity = 110/229 (48.03%), Postives = 154/229 (67.25%), Query Frame = 2
Query:   17 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELEGLLMK 703
            K W F +QALP DL+KRG+AVED ++ HG++L IDDYP+A DGL++W  +K WVTDY + YY     +  D+ELQAWW E+R VGH DKK+EPWW  ++TPQ LI+  TTIIW+AS  HAAVNFGQY YA Y PNRPT++R  MP+    E  ++   + P+ A L T     Q +L ++ +++LS H+ DE +LG+ + P W +D    AAF +   +  ++E  +M+
Sbjct:  594 KDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWVTDYCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRKFMPEPGTPE--YEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQ 820          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.225e-62
Identity = 109/224 (48.66%), Postives = 151/224 (67.41%), Query Frame = 2
Query:   17 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMELE 688
            K W F +QALP DL+KRG+AVED ++ HG++L I+DYP+A DGL++W  +K WVTDY + YY     +  D+ELQAWW E+R VGH DKK+EPWWP ++TPQ LI+  TTIIW+AS  HAAVNFGQY YA Y PNRPT++R  MP+    E  ++     P+ A L T     Q +L ++ +++LS H+ DE +LG+ + P W +D    AAF +   +  ++E
Sbjct:  595 KDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPE--YEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIE 816          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 8.781e-60
Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 2
Query:   17 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFXKISGRXMEL 685
            K W F EQALPKDL+KRG+AVEDPN+ +G+KL I+DYPFA DGL++W  +K WVT+Y   YY +   V++D E+Q+WWTE+RT GH DK+ E WWP ++T  +LIE  T IIW+AS  HAAVNFGQY YA + PNRPT++R  MP+    E  +    E  + A L T     Q +L I+ +++LS HS DE +LG+   P W  D     AF +  G+ +EL
Sbjct:  615 KNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLIEDYPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFMPEPGTDE--YAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRF-GKELEL 834          
BLAST of EY660486 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.498e-59
Identity = 108/229 (47.16%), Postives = 149/229 (65.07%), Query Frame = 2
Query:    5 ASDDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNXDQAILVIATLDLLSTHSPDEEFLGKGKEPA-WGEDPVINAAFXKISGRXMELE 688
            A+   +WRFD + LP DL++RGMAV DP   HGLKL ++DYP+A DGL LW  ++ WV  YV  YY + +L+++D ELQAW++E   VGHAD +D  WWP L T ++L+ ++TTIIW+AS  HAA+NFGQY Y  Y PNRP + R  +PDE   E  + +FIE P+     + P+  Q    +A +D LSTHSPDEE++G+ ++P+ W  D  I  AF   S     +E
Sbjct:  655 AAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPE--FTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIE 881          
The following BLAST results are available for this feature:
BLAST of EY660486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
LOX2_ARATH1.536e-8862.56Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU1.648e-7456.44Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC2_ORYSJ9.045e-7354.59Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOXC1_ORYSJ9.045e-7354.59Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX21_HORVU1.874e-7259.35Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX22_HORVU1.190e-6553.92Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOXA_SOLLC6.497e-6348.03Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_SOLTU3.225e-6248.66Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOX5_ARATH8.781e-6049.78Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX4_ARATH1.498e-5947.16Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660486 ID=EY660486; Name=EY660486; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGATGATAAGCAATGGCGATTTGACGAACAAGCACTCCCCA
AAGACCTTATGAAGAGGGGAATGGCCGTTGAAGATCCAAATGCTCGACAC
GGCTTAAAGCTAACAATTGACGACTATCCTTTTGCCAAGGACGGTCTCGA
TCTATGGGGTATCTTAAAACAATGGGTTACCGATTATGTGAATCACTACT
ATCCTGATCAAAGTCTTGTCGAGTCTGATGATGAACTCCAAGCTTGGTGG
ACTGAAATTCGAACTGTCGGACACGCTGACAAAAAGGATGAACCTTGGTG
GCCTGTCCTGAAAACCCCTCAGAATTTGATTGAAATCTTAACAACTATCA
TTTGGGTAGCATCTGGTCACCATGCAGCTGTAAACTTTGGCCAATACACA
TATGCAGCCTACTTCCCCAACAGGCCAACAATTGCAAGAGTAAACATGCC
AGATGAAGATCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTG
AAGATGCACTTTTGTACACCTTCCCCAATCANGATCAAGCCATTCTAGTT
ATAGCCACCCTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTT
AGGGAAAGGTAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTG
CATTCNAGAAAATTAGTGGCAGGNTGATGGAGCTTGAAGGATTATTGATG
AAAGGATGGAGATAGCACTTTGGTGATTAGAAATGGAGCTGGGGTTGTTC
CTTATATCTCTTGAAGCATTATTGAAAGATGGAGAACAAGAGAAGGAATT
TCTTACAGCATCTCTTCTAAACTCGCTGAAGTCCGGTCTTGGGCCAAAAC
TTTCAAAGCATGCATTGGGGTCGCCAAACTTTAGAGGCTTGATCTTTTTA
TTTA
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