EY660456

Overview
NameEY660456
Unique NameEY660456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_XENTR (S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 61/196 (31.12%), Postives = 100/196 (51.02%), Query Frame = 2
Query:  134 YEVSKLVLLNVAPNLQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMVAYT---ILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAM 712
            YE +K +L + +  L  + +   ++     +   +R+P EV+KQR Q    +   + +  T  Q+G+KG +RG  +T+ RE+PF +V   L+   K +     GR ++ W++   GA +GG  A +TTP DV KTR+M A  G       V +    I R +G +GLF G +PR   I+  G +    Y+  +  M
Sbjct:   71 YESAKQLLRSDSSYLSPI-IHMAAASLGEVVACLIRVPSEVIKQRAQVSPSSTTYQMLSATLRQEGIKGLYRGYKSTVLREIPFSLVQFPLWESLKDLWSWKQGRAVDSWQSAVCGAFAGGFAAALTTPLDVAKTRIMLAKAGSGVASGNVLFALHEIWRTQGIMGLFAGVIPRMTAISLGGFIFLGAYDKVRTLM 265          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_XENLA (S-adenosylmethionine mitochondrial carrier protein OS=Xenopus laevis GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 60/196 (30.61%), Postives = 101/196 (51.53%), Query Frame = 2
Query:  134 YEVSKLVLLNVAPNLQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMVAYT---ILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAM 712
            YE +K  L + +  L  + +   ++F    +   +R+P EV+KQR Q    +   + +  T  ++G+KG +RG  +T+ RE+PF +V   L+   K +     GR ++ W++   GA +GG  A +TTP DV KTR+M A  G       V +    I R +G +GLF G +PR   I+  G +    Y+  + ++
Sbjct:   71 YESAKRFLGSDSSYLSPI-IHMAAAFLGELVACLIRVPSEVIKQRAQVSPSSTTYQMLSVTLREEGIKGLYRGYKSTVLREIPFSLVQFPLWEFLKNLWSWKQGRAVDCWQSAVCGAFAGGFAAAVTTPLDVAKTRIMLAKAGSGVANGNVLFALHEIWRTQGIMGLFAGVIPRMTMISLGGFIFLGAYDKVRSSL 265          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_DANRE (S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.820e-21
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  236 VRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQG---RAATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAM 712
            +R+P EV+KQR QA    +    ++ +  ++G +G +RG G+T+ RE+PF +V   L+   K +  +  G  L+ W+    GAL+GG+ A +TTP DV KT +M A  G    +  + MV   + R  G  GLF G++PR  +I+  G +    YE  ++ +
Sbjct:  105 IRVPTEVVKQRTQANPSISTYRVLLNSLQEEGFRGLYRGYGSTVLREIPFSLVQFPLWEYLKAVWWRRQGGRLDSWQAAVCGALAGGVAAFVTTPLDVAKTWIMLAKAGTSTASGNIPMVLCEVWRSRGIPGLFAGSIPRVMFISMGGFIFLGAYEKVRRTL 266          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_DROME (S-adenosylmethionine mitochondrial carrier protein homolog OS=Drosophila melanogaster GN=CG4743 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  134 YEVSKLVLLNVAPNLQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFNNVG--EAIVGTWHQDGLK-GFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQ---GRAATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAM 712
            YE  K  L +V        V   ++  +  L   +R+P E+ KQR Q    N     + ++  +  +GLK G +RG G+T+ RE+PF ++   L+   K     L G +  P+     GA++GG++A +TTP DV+KTR+M A +    R  +   + + I    G  GLF G +PR  WI   GA  F  Y+L  + +
Sbjct:   78 YECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQTLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGFDSTPFSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNRRRSARRILHGIYLERGFSGLFAGFVPRVLWITLGGAFFFGFYDLTTRIL 276          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: PET8_YEAST (Putative mitochondrial carrier protein PET8 OS=Saccharomyces cerevisiae GN=PET8 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 2
Query:  200 ISSFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGF----FRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGR-ELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAMXQNDEVADEL 742
            +SS         VR+P EV+KQR Q    N+  + +      D  +G     +RG   T+ RE+PF  +   LY   KK   +  G+ ++EPW+    G+++GG+ A  TTP D +KTR+M       A++  V   I R EGP   F G  PR  WI+  GA+    YE     + ++   A E+
Sbjct:   99 LSSSIGEICACLVRVPAEVVKQRTQVHSTNSSWQTLQSILRNDNKEGLRKNLYRGWSTTIMREIPFTCIQFPLYEYLKKTWAKANGQSQVEPWKGAICGSIAGGIAAATTTPLDFLKTRLML--NKTTASLGSVIIRIYREEGPAVFFSGVGPRTMWISAGGAIFLGMYETVHSLLSKSFPTAGEM 282          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_MOUSE (S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19
Identity = 52/164 (31.71%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  236 VRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMV---AYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYELAKKAMXQ 718
            +R+P EV+KQR Q    +   +  +    ++G++G +RG  +T+ RE+PF +V   L+   K +     G  ++ W++   GA +GG  A +TTP DV KTR+M A  G +  +  V    + + R +G  GLF G LPR   I+  G +    Y+ A+  + +
Sbjct:  105 IRVPSEVVKQRAQVSASSKTLQIFLTILSEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWAWRRGHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRIMLAKAGSSTAVGNVLSAMHGVWRSQGLAGLFAGVLPRMAAISMGGFIFLGAYDQARSLLLE 268          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_BOVIN (S-adenosylmethionine mitochondrial carrier protein OS=Bos taurus GN=SLC25A26 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.027e-17
Identity = 56/188 (29.79%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  134 YEVSKLVLLNVAPNLQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMV---AYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAG 688
            YE  K +L   + +        +++     +   +R+P EV+KQR Q    +           Q+G++G +RG  +T+ RE+PF +V   L+   K +      R ++ W+    GA +GG  A +TTP DV KTR+M A  G +     +    + + R +G  GLF G  PR   I+ LG   F G
Sbjct:   71 YEYVKWILHTDSSSYLMPVTHMLAASVGEVVACLIRVPSEVVKQRAQVSASSGTFHIFSNILCQEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDRVVDSWQAAVCGAFAGGFAAAVTTPLDVAKTRIMLAKAGSSTASGNILSALHAVWRTQGLSGLFAGVFPRMAAIS-LGGFIFLG 257          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: YDE9_SCHPO (Uncharacterized mitochondrial carrier C12B10.09 OS=Schizosaccharomyces pombe GN=SPAC12B10.09 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.289e-17
Identity = 60/193 (31.09%), Postives = 99/193 (51.30%), Query Frame = 2
Query:  134 YEVSKLVLLNVAPNLQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAG----LFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELE-PWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYEL 697
            YE  K  L      L + Q+   S+         VR+P EV+KQR QA        N+ + I+ +   +  + F+ G G T+ RE+PF ++   ++   K   +    R      E    G+++GG+ A +TTPFDV+KTR+MT+ Q  +   ++   +I+ HEG L L+KG +PR  W++  GA+    Y++
Sbjct:  147 YENMKSRLSQSGLGLSDPQIHMCSASLGEIAACIVRVPTEVIKQRAQASGGTLSSRNILQTILKS--NNVWRDFYAGYGITIAREIPFTLIQFPIWEHLKLKWRIKHSRNKNLAHEAAISGSIAGGIAAALTTPFDVVKTRIMTSQQRLSYVFTI--KSIVAHEGFLALYKGIVPRVLWLSGGGAIFLGCYDV 335          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: SAMC_HUMAN (S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens GN=SLC25A26 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  236 VRIPCEVLKQRLQAGLFNNVGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRELEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRA---ATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAG 688
            +R+P EV+KQR Q        +      +++G++G +RG  +T+ RE+PF +V   L+   K +        ++ W++   GA +GG  A +TTP DV KTR+  A  G +     +  V + + R +G  GLF G  PR   I+ LG   F G
Sbjct:  105 IRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRITLAKAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAIS-LGGFIFLG 257          
BLAST of EY660456 vs. ExPASy Swiss-Prot
Match: PET8_ASHGO (Putative mitochondrial carrier protein PET8 OS=Ashbya gossypii GN=PET8 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 63/186 (33.87%), Postives = 85/186 (45.70%), Query Frame = 2
Query:  176 LQELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFNN------------VGEAIVGTWHQDGLKGFFRGTGATLCREVPFYVVGTGLYGESKKMVQQLLGRE-LEPWETIFVGALSGGLTAVITTPFDVMKTRMMTAPQGRAATMSMVAYTILRHEGPLGLFKGALPRFFWIAPLGAMNFAGYE 694
            L E+    +SS         VR+P EV+KQR Q    N+             GE +V        +G +RG   T+ RE+PF  +   LY   KK        E +  W+    G+L+GG+ A  TTP DV+KTRMM     R   M  +A T+ R EG    F+G  PR  WI+  GA+    YE
Sbjct:   90 LAEVLTHMLSSSLGEMSACLVRVPAEVIKQRTQTHHTNSSLQTLRLILRDPTGEGVV--------RGLYRGWWTTIMREIPFTCIQFPLYEYLKKKWAAYAEIERVSAWQGAVCGSLAGGIAAAATTPLDVLKTRMML--HERRVPMLHLARTLFREEGARVFFRGIGPRTMWISAGGAIFLGVYE 265          
The following BLAST results are available for this feature:
BLAST of EY660456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
SAMC_XENTR8.979e-2231.12S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_XENLA2.000e-2130.61S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_DANRE5.820e-2133.95S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_DROME2.888e-2031.66S-adenosylmethionine mitochondrial carrier protein... [more]
PET8_YEAST6.434e-2032.26Putative mitochondrial carrier protein PET8 OS=Sac... [more]
SAMC_MOUSE2.445e-1931.71S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_BOVIN1.027e-1729.79S-adenosylmethionine mitochondrial carrier protein... [more]
YDE9_SCHPO2.289e-1731.09Uncharacterized mitochondrial carrier C12B10.09 OS... [more]
SAMC_HUMAN5.098e-1732.47S-adenosylmethionine mitochondrial carrier protein... [more]
PET8_ASHGO5.098e-1733.87Putative mitochondrial carrier protein PET8 OS=Ash... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660456 ID=EY660456; Name=EY660456; organism=Citrus sinensis; type=EST; length=874bp
CCACGCGTCCGGCTATTAAATGTTGCTCCCAATCTACAAGAGCTTCAGGT
TCAATCTATATCATCATTCTGTAGCACAAGCTTACTTACTTCGTATATTC
CGGTTCGCAGGCCATGGCTTGAAAACCGGAATATACGAAGTAAGTAAGCT
TGTGCTATTAAATGTTGCTCCCAATCTACAAGAGCTTCAGGTTCAATCTA
TATCATCATTCTGTAGCACATTTTTGGGGACAGCTGTGCGGATTCCTTGT
GAAGTACTCAAGCAGCGGTTGCAGGCTGGGCTATTTAACAATGTTGGAGA
AGCTATTGTTGGTACTTGGCATCAGGATGGTCTTAAGGGTTTCTTCCGTG
GAACTGGTGCCACTCTTTGCCGGGAGGTCCCATTCTACGTTGTTGGCACA
GGACTTTATGGAGAATCCAAGAAGATGGTCCAGCAACTTCTTGGGCGGGA
GTTGGAGCCCTGGGAAACAATCTTTGTTGGAGCTTTATCCGGAGGGCTAA
CTGCTGTTATCACTACACCTTTTGACGTTATGAAAACTAGAATGATGACT
GCTCCACAGGGTCGAGCTGCAACAATGTCGATGGTAGCCTACACTATACT
CCGTCATGAGGGACCCCTTGGCCTATTTAAGGGAGCACTGCCCCGATTTT
TCTGGATTGCTCCTCTGGGTGCTATGAACTTTGCAGGCTATGAGCTAGCT
AAGAAAGCCATGGNACAAAATGATGAAGTAGCAGATGAGTTGTCCCAGAA
AGAGTTGGCTAGCTCTGGATAGATACAAGTATAGTCCTACTACTAACTCA
TGGAATTTTGTCTTGAGCAATTAGTGCTGCCTGAAAAGTTTGTGCACTTT
CTGAAACACTAGCGGCATTTGCTT
back to top