EY660431

Overview
NameEY660431
Unique NameEY660431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660431 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.291e-42
Identity = 84/178 (47.19%), Postives = 106/178 (59.55%), Query Frame = 1
Query:   76 SLLLDSTRKTLSEKEMDKTFGIEELQVH*DHHRSW**RVPW--SCF-LC*YSCPVRNRWRRCAWTPLHSSRDRTKRC*L*PTIDT*AVSPSMRDDSMTGDLERFAAIGIDAPGLVALL*SHRVGTTRCVKLEHPLYPELDPALDPDHVPHMLHNCPDAIPYPQAVQDVRNDRATPVVL 600
            SLLLDSTR+ L EKE D++FG+   +   +   +     P   SC  +   S           + PL + R    R  L    D         ++S++  LE+F +IGID PGLVALL SH VG T CVKL H LYPE+DP+L+PDHVPHMLH CPD+IP P+AVQ VRNDR TP+VL
Sbjct:   81 SLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGR----RDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVL 254          

HSP 2 Score: 45.0542 bits (105), Expect = 2.291e-42
Identity = 18/25 (72.00%), Postives = 19/25 (76.00%), Query Frame = 3
Query:    3 HKNTALSWLTNIFHDCDCQSCDRHL 77
            HKNTA SWL NIFHDC  +SCD  L
Sbjct:   58 HKNTAFSWLRNIFHDCAVESCDASL 82          

HSP 3 Score: 38.1206 bits (87), Expect = 2.291e-42
Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 3
Query:  588 PSGAGTHYYMDILDNTGLMMGDHQLASRQRYR-LMLRNARETQLLLHGFSRTITL 749
            P     +YY +ILDN GL++ DHQLA  +R R ++ + A++       F+R I +
Sbjct:  251 PMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQI 305          
BLAST of EY660431 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.821e-33
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 1
Query:  346 DDSMTGDLERFAAIGIDAPGLVALL*SHRVGTTRCVKLEHPLYPELDPALDPDHVPHMLHNCPDAIPYPQAVQDVRNDRATPVVL 600
            +DS++  +  F +IGID    VALL +H VG   CV L H LYP +DP LDP +  ++   CP   P P AV   RNDR TP+V+
Sbjct:  170 NDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVV 254          

HSP 2 Score: 55.8398 bits (133), Expect = 5.821e-33
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 2
Query:  143 RSFRYIEIIIEAGDRECPGVASCADILVLCGTDGVVALGRPYIP-LETGRRDASYSLP*ILEQSLP 337
            R+F+Y++II +A ++ECP   SCADI+ L   DG+V L  P I  ++TGRRD+  S    +E  +P
Sbjct:  102 RNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIP 167          

HSP 3 Score: 42.743 bits (99), Expect = 5.821e-33
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 3
Query:    3 HKNTALSWLTNIFHDCDCQSCDRHL---TASGLDKK 101
            H NTA+SWL N+FHDC  +SCD  L   TA G++ +
Sbjct:   57 HGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESE 92          

HSP 4 Score: 23.0978 bits (48), Expect = 5.821e-33
Identity = 14/48 (29.17%), Postives = 25/48 (52.08%), Query Frame = 3
Query:  609 YYMDILDNTGLMMGDHQLASRQRYR-LMLRNARETQLLLHGFSRTITL 749
            YY +I+ + GL++ D +LA+  R    + + A +       FSR + L
Sbjct:  258 YYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRL 305          
BLAST of EY660431 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 1.009e-11
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 2
Query:  176 AGDRECPGVASCADILVLCGTDGVVALGRPYIPLETGRRDASYS 307
            A + +CPGV SCADIL L   D VV +G P   +E GRRD   S
Sbjct:  116 AVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVS 159          

HSP 2 Score: 40.0466 bits (92), Expect = 1.009e-11
Identity = 21/75 (28.00%), Postives = 40/75 (53.33%), Query Frame = 1
Query:  361 GDLERFAAIGIDAPGLVALL*SHRVGTTRCVKLEHPL-----YPELDPALDPDHVPHMLHNCPDAIPYPQAVQDV 570
            G ++ FA+ G+    ++AL  +H +G++ C +  + L     +  +DP +DP +   ++  C D  P P AV D+
Sbjct:  177 GLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAVVDI 249          

HSP 3 Score: 23.0978 bits (48), Expect = 1.009e-11
Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 3
Query:   12 TALSWLTNIFHDCDCQSCD 68
            TA + L   FHDC  + CD
Sbjct:   62 TAPATLRMFFHDCFVEGCD 80          
BLAST of EY660431 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 41.5874 bits (96), Expect = 7.825e-11
Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = 2
Query:  152 RYIEIIIEAG---DRECPGVASCADILVLCGTDGVVALGRPYIPLETGRRDASYS 307
            R  EII +A    +  CPGV SCADIL L   D VV  G     + TGRRD   S
Sbjct:  101 RGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVS 155          

HSP 2 Score: 41.2022 bits (95), Expect = 7.825e-11
Identity = 22/67 (32.84%), Postives = 35/67 (52.24%), Query Frame = 1
Query:  349 DSMTGDLERFAAIGIDAPGLVALL*SHRVGTTRCVKLEHPLY-----PELDPALDPDHVPHMLHNCP 534
            DS+    ++FAA G++   LV L+  H +GT+ C    + L+        DPA+DP  V ++   CP
Sbjct:  168 DSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCP 234          

HSP 3 Score: 24.6386 bits (52), Expect = 7.825e-11
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 3
Query:   39 FHDCDCQSCDRHLTASG 89
            FHDC  Q CD  +  SG
Sbjct:   71 FHDCFVQGCDGSILISG 87          
The following BLAST results are available for this feature:
BLAST of EY660431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PER42_ARATH2.291e-4247.19Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH5.821e-3345.88Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER55_ARATH1.009e-1152.27Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER2_ARAHY7.825e-1147.27Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660431 ID=EY660431; Name=EY660431; organism=Citrus sinensis; type=EST; length=895bp
GCCACAAGAACACTGCATTATCTTGGCTTACAAACATTTTCCATGACTGC
GACTGTCAATCTTGTGATCGTCATCTCACTGCTTCTGGACTCGACAAGAA
AGACCTTGTCTGAGAAGGAGATGGACAAGACCTTTGGTATCGAGGAGCTT
CAGGTACATTGAGATCATCATAGAAGCTGGTGATAGAGAGTGCCCTGGAG
TTGCTTCCTGTGCTGATATTCTTGTCCTGTGCGGAACAGATGGCGTCGTT
GCGCTTGGACGCCCTTACATTCCTCTCGAGACAGGACGAAGAGATGCTAG
CTATAGCCTACCATAGATACTTGAGCAGTCTCTCCCAGTATGCGCGACGA
CAGCATGACTGGTGATCTTGAGAGGTTTGCAGCCATTGGCATCGACGCCC
CTGGACTTGTTGCTCTGCTATGATCTCACAGGGTTGGCACAACTCGTTGT
GTGAAGCTGGAGCACCCTCTGTACCCAGAACTAGACCCTGCACTAGACCC
TGACCATGTTCCGCATATGCTCCATAATTGTCCTGATGCAATCCCATACC
CTCAGGCTGTTCAGGATGTGAGGAATGACCGTGCGACCCCAGTGGTGCTG
GCACACACTACTATATGGACATATTGGACAACACGGGCTTGATGATGGGT
GATCATCAACTAGCCAGCCGACAGAGGTACAGACTTATGCTGAGAAATGC
TCGAGAGACACAACTACTTCTTCATGGATTTTCAAGAACCATTACTCTCT
TTCCAAAACGACCCTCCCGCGCGACAAAGGTGAGATCCGAATGGTTGCTT
CCTGCAAAAAGCTCCCTACAGGACTGGCTTGCTACGCCTGATTACCTAAA
AAGTAAAAGTCCAATTTTTCTTCCTGGTTCTTCATGAGAATAAAA
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