EY660424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.687e-40 Identity = 105/247 (42.51%), Postives = 127/247 (51.42%), Query Frame = 1 Query: 169 WARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG--------RTGATPE-----GHHXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGN-QYLDQYSTGNNNQQQHGVAQKGYVGDSVVPVQCEXLTRXXXXXAKFSLGLDYDSLXXI*LPR-SISHSVSV 864 WA+ CDTCR+AACTVYC+AD AYLCS+CD++VH ANR+A RHERV VC+SCE+APAAF EIHSANPLARRHQRVPILPIS Y T PE G AASWLL + DE+L+LVDY+ + Q+ DQ N Q V Q+ Y D VVP+Q E F L ++ S + S+SH V+V Sbjct: 8 WAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG---------DEFLNLVDYSSSDKQFTDQ---SNQYQLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNV 242
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.311e-39 Identity = 104/232 (44.83%), Postives = 120/232 (51.72%), Query Frame = 1 Query: 124 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPEGHHXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGG--NQYLDQYSTGNNNQQQHGVAQKGYVGDSVVPVQCEXLT-RXXXXXAKFSLGLDY 810 M+KEE WAR CDTCR+AACTVYC+AD AYLC+ CD+RVH ANRVA RHERV VC+SCE APAAF EIHSANPLARRHQRVPILP+S + A E ASWLL + EYLDLVDY+ NQ+ D NQ H Q+ + GD VVP+Q E T F LG++Y Sbjct: 1 MLKEESNESGT----WARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSM--APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGV--------EYLDLVDYSSSMDNQFED-------NQYTH--YQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINY 209
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36 Identity = 97/230 (42.17%), Postives = 116/230 (50.43%), Query Frame = 1 Query: 124 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG---------RTGATPEGH--------HXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSTG--NNNQQQHGVAQKGYVGDSVVPVQCE 756 M+K+E AR CDTCR+ ACTVYC AD AYLC +CD++VH ANRVA RH+RV VCESCE+APAAF E+HSANPLARRHQRVPILPISG+ + +T PE ASWL + DEYL+LVDY N +D TG + +QQ V Q Y GD VVP++ E Sbjct: 1 MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--------DEYLNLVDY---NSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLE 219
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.191e-24 Identity = 54/123 (43.90%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 172 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPEGHHXXXXXXXXAASWLL 540 +R+CD+C++ A T++C+AD A+LC CD ++H AN++A RHERV++CE CEQAPA +IHSANPL+RRH+RVPI P +V G A+ + ASWLL Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV-GPAKSASSSVNFVDEDGGDVTASWLL 126
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.935e-23 Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 172 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYG-GRTGATP------------EGHHXXXXXXXXAASWLLL 543 +++CD+C++A +YC+ D A+LC +CDS+VH AN++A RH RV++CE CEQAPA +IHSANPLARRH+RVP+ P SV G T +G+ AASWLLL Sbjct: 3 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASWLLL 139
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19 Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 172 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPI 438 AR CD C++ V+C+ D A+LC ACD+R+H RHERV+VCE CEQAPAA +IHSANPLA RH+RVP+ Sbjct: 19 ARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPV 103
BLAST of EY660424 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 175 RVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISG 453 R+CD C ++ VYCKAD A LC ACD +VHVAN++ +H R +C+SC ++P++ + H+A+ + H R P +G Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTG 101 The following BLAST results are available for this feature:
BLAST of EY660424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660424 ID=EY660424; Name=EY660424; organism=Citrus sinensis; type=EST; length=901bpback to top |