EY660415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 4.052e-35 Identity = 81/117 (69.23%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 129 EIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYST 476 ++KKYAS+VRV+AHTQIRKMKGLKQKKAHLMEIQ+NGGTIA+KVDY Y FFEK+IPVDA FQKDEMID +GV KG+GYE GV LPR T LR +GAW PARV T Sbjct: 152 KMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWHPARVSYT 266
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 148.288 bits (373), Expect = 6.912e-35 Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 3 Query: 129 EIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYSTFCPELGRMDYLLFYRNELQR 536 ++KKYA+V+RVLAHTQIRKMKGLKQKKAH+MEIQ+NGGTIA+KVD+AY FFEKQIP++A FQKDEMID +GV KG+GYE GV LPR T LR +GAW PARV T G+ Y +R EL + Sbjct: 152 KMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWHPARVSYTVA-RAGQNGY--HHRTELNK 283
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 143.28 bits (360), Expect = 2.223e-33 Identity = 83/127 (65.35%), Postives = 93/127 (73.23%), Query Frame = 3 Query: 102 GRKDPRSAGE-IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYST 476 G+KD +S E +KKY SV+RVLAHTQIRKMKGLKQKKAHL EIQ+NGG IA+KVDYA FEKQ+PVDA FQKDEMID +GV KG+GYE GV LPR T LR +GAW PARV T Sbjct: 142 GKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWHPARVSYT 266
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.706e-25 Identity = 71/137 (51.82%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 99 SGRKDPRSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYSTFCPELGRMDY 506 +G R IKKY +VVRVLAHTQIRK LKQKKAHLMEIQVNGG++A+KVD+A FEK I +D+ F+KDEMID + V KG G++ G LPR T LR +GAW P+ V T G+M Y Sbjct: 141 NGASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK--LPRKTHKGLRKVACIGAWHPSHVQWTVA-RAGQMGY 273
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.203e-24 Identity = 64/127 (50.39%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 99 SGRKDPRSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYST 476 +G R IKKY +VVRVLAHTQIRK LKQKKAHLMEIQ+NGG++A+KV++ +G FEK + +D+ F+KDE+ID + V KG G+ G LPR T LR +GAW P+ V T Sbjct: 141 NGAAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK--LPRKTHKGLRKVACIGAWHPSHVQWT 264
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.597e-23 Identity = 67/126 (53.17%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 102 GRKDPRSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYST 476 G + R IKKYASVVRVLAHTQI+K L QKKAHL EIQVNGG++++KVD+A FEK + VD+ F+KDEM+D V KG G+E G LPR T LR +GAW PA V T Sbjct: 141 GAQVERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKK--LPRKTHRGLRKVACIGAWHPANVQWT 263
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.558e-23 Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 102 GRKDPRS-AGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAF----LPRLTEVCLR-WT*LGAWSPARVYST 476 GRK + ++KKY S +RV+AHTQ++ MK ++KKAH+MEIQ+NGGT+AEKVD+A EKQ+PVD+ F +DEMID +GV KG+G++ GV + LPR T LR +GAW P+RV T Sbjct: 142 GRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFK------GVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFT 265
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 4.647e-23 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 96 ASGRKD-PRSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAF----LPRLTEVCLR-WT*LGAWSPARV 467 A G+K R +KKY V+RV+AHTQ+R + L+QKKAHLME+QVNGGT+AEK+D+A E+Q+PV F +DEMID +GV KG+GY+ GV + LPR T LR +GAW PARV Sbjct: 140 ADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYK------GVTSRWHTKKLPRKTHRGLRKVACIGAWHPARV 262
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.647e-23 Identity = 67/130 (51.54%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 90 THASGRKDPRSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARVYST 476 T G R IKKYASVVRVLAHTQ+RK L QKKAHL EIQ+NGG+++EKVD+A FEK + VD+ F+++EMID + V KG G+E G LPR T LR +GAW PA V T Sbjct: 138 TAQDGAAIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK--LPRKTHRGLRKVACIGAWHPAHVMWT 264
BLAST of EY660415 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 1.035e-22 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 117 RSAGEIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDADFQKDEMIDPLGVPKGQGYERCCPPVGVLPAFLPRLTEVCLR-WT*LGAWSPARV 467 R IKKYASVVRVL HTQIRK L QKKAHL EIQ+NGG+I+EKVD+A FEK + VD+ F+++EMID + V KG G+E G LPR T LR +GAW PA V Sbjct: 146 RELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK--LPRKTHRGLRKVACIGAWHPAHV 260 The following BLAST results are available for this feature:
BLAST of EY660415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660415 ID=EY660415; Name=EY660415; organism=Citrus sinensis; type=EST; length=1031bpback to top |