EY660413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.563e-67 Identity = 136/226 (60.18%), Postives = 155/226 (68.58%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG---GSPTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEE-------SAMKLQQSDLDLRLTPRXTGK--VPPEVKRRPGTPSMNSGGSGTTT 817 MSCNGCRVLRKGCSE+CILRPC+QWIE+ ++QGHATVFVAKFFGRAGLMSFISAVP+SQRPALFQSLLYEACGRTVNPVNGA+G+LWTGNW++CQAAVETVLRGG+LRP+PELL G G P+PTS++ SE CT+M LQ S+ S+LDL L P K P +RR TPSMNS SGTTT Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASE---ICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSEDQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTT 223
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.344e-65 Identity = 120/144 (83.33%), Postives = 131/144 (90.97%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG--GSPTPTSDDVSEAEVTCTDMSRLQ 601 MSCNGCRVLRKGCSE+CILRPC+QWIESPE+QGHATVFVAKFFGRAGLMSFISAVPESQ PALFQSLLYEACGRTVNPVNGAVGLLWTGNW+VCQAAVETVLRGG+L+P+PELLN G G P+PTSD+ SE CT+M L+ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASE---ICTEMLNLR 141
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.382e-59 Identity = 131/227 (57.71%), Postives = 148/227 (65.20%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEESAMKLQ-QSDLDLRLTPRXTGKVPPE-----VK-RRPGTPSMNSGGSGTTTCLESGV 835 MSCNGCRVLRKGCSE+CILRPCLQWIES ESQGHATVFVAKFFGRAGLMSFIS+VPE QRPALFQSLL+EACGRTVNPVNGAVG+LWT NWHVCQAAVETVLRGGTLRP+ +LL SP+ +E+ D+SR Q +S + LQ L L +PP VK RPG+PS S TT+C E+G+ Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLE----SPSLMISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSPSEE---SVTTSCWENGM 220
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.200e-44 Identity = 77/110 (70.00%), Postives = 96/110 (87.27%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPV 505 MSCNGCRVLRKGCSE+C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ ++ P+ RPA+F+SLLYEACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG + P+ Sbjct: 3 MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.199e-40 Identity = 74/121 (61.16%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSP 538 MSCNGCRVLRKGCSE C +RPCL WI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P RP +F+SLL+EACGR VNP+ G+VGLLW+GNW +CQ AVE V++G ++ + + G P Sbjct: 3 MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGP 123
BLAST of EY660413 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.856e-39 Identity = 70/111 (63.06%), Postives = 92/111 (82.88%), Query Frame = 2 Query: 176 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVP 508 +SCNGCRVLRKGC++ C +RPCLQWI+S +SQ +AT+F+AKF+GRAGL++ I + P+ RPA+F+SLLYEACGR VNPV+G+VGL+W+GNW CQAAV+ VL G + P Sbjct: 3 ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTP 113 The following BLAST results are available for this feature:
BLAST of EY660413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660413 ID=EY660413; Name=EY660413; organism=Citrus sinensis; type=EST; length=908bpback to top |