EY660411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_PARL1 (Peptide chain release factor 1 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=prfA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 616 KDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 +DM +MA EE+ +E R PKD AD+R+ ILEVRAGTG + A+ A D+F+MYERY+ +GWKVE + +E ++ GY++++ Sbjct: 67 RDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGGDEAALFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEII 158
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_PROM2 (Peptide chain release factor 1 OS=Prochlorococcus marinus (strain MIT 9215) GN=prfA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16 Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 EI+ K+L+ E DK+M + EEL + + + PKD DER +LE+RAG G A A D+ +MYERY QK GW V+SV +ESD+ G+++LV Sbjct: 62 EIEDSKNLLKENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACIWAGDLARMYERYGQKVGWSVKSVSASESDMGGFKELV 168
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_NOVAD (Peptide chain release factor 1 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=prfA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 610 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 +D DM ++A EEL E P+D AD R +LE+RAGTG + A+ A D+F+MYERY+ ++GW+VE++ V +DL GY+++V Sbjct: 66 DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTGGDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVV 159
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_RHILW (Peptide chain release factor 1 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=prfA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15 Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E+ L++L+ + S D++M D+A EL ++ + PKD ADE+ ILE+RAGTG A+ A D+F+MYER+S ++GWKVE + +E + GY++++ Sbjct: 58 ELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEII 164
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_METSB (Peptide chain release factor 1 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=prfA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15 Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E++GL +++ + + D +M +A EEL A + + PKD ADER ILEVRAGTG + A+ A D+F+MY+RY++ +GW VE + E G+++++ Sbjct: 56 EVEGLAAMLADPTTDSEMRGLAEEELRDAKERLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEII 162
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_PROM0 (Peptide chain release factor 1 OS=Prochlorococcus marinus (strain MIT 9301) GN=prfA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 EI+ K+L+ E DK+M + EEL + + PKD DER +LE+RAG G A A D+ +MYERY QK GW V+ V +ESD+ G+++LV Sbjct: 62 EIEDSKNLLKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELV 168
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_RHIL3 (Peptide chain release factor 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=prfA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15 Identity = 40/107 (37.38%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E+ L++L+ + S D++M D+A EL ++ + PKD ADE+ ILE+RAGTG A+ A D+F+MYER++ ++GWKVE + +E + GY++++ Sbjct: 58 ELADLETLLEDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_BARHE (Peptide chain release factor 1 OS=Bartonella henselae GN=prfA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 EI L+++I + D +M +A EEL L + ++ PKD ADE+ I+E+RAGTG A+ A D+F+MYERY+ WKVE V + E ++ GY++++ Sbjct: 58 EITDLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEII 164
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_PROMP (Peptide chain release factor 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=prfA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 EI K L+ E DKDM + EEL D + + PKD DER +LE+RAG G A A D+ +MYERY QK GW V+ + +ESD+ G+++LV Sbjct: 62 EIGDSKQLLKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELV 168
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_AGRT5 (Peptide chain release factor 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=prfA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E L++L+ + + DKDM D+A EL + PKD ADE+ ILE+RAGTG A+ A D+F+MYER++ +GWKVE + +E + GY++++ Sbjct: 58 EAADLEALLADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEII 164 The following BLAST results are available for this feature:
BLAST of EY660411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660411 ID=EY660411; Name=EY660411; organism=Citrus sinensis; type=EST; length=892bpback to top |