EY660285

Overview
NameEY660285
Unique NameEY660285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10494 contig Csv1_Contig10494:717..1575. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660285 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.099e-23
Identity = 70/178 (39.33%), Postives = 86/178 (48.31%), Query Frame = 1
Query:   85 KSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSTMPKKDQDKRTVSPHRFPLLRSGSISNRPKTPNARRPMXXXXXXXXXXXASDAKRRYPSEPRKSYSMRMPAERENCKDFE-QHPXXXXXXXXXXXXXXXXXXDDMLYTYLDEY 615
            K KY G SL+D DDW+QFRNAV                                        FTST+PKK+QDKR+VSPHRFPLLRSGS++ R K+ +  RP             S    RYPSEPR+S S+R+  E++N K+ E Q P                  DD LYT+LDEY
Sbjct:  149 KLKYFGSSLEDADDWNQFRNAVRATIRETPPPPVRKSTSQSSSPRQPPQRSATFS-------FTSTIPKKEQDKRSVSPHRFPLLRSGSVATR-KSASISRP------TTPSKSRSITPIRYPSEPRRSASVRVAFEKDNQKETEQQQPSKSKRLLKALLSRRKTKKDDTLYTFLDEY 312          

HSP 2 Score: 23.8682 bits (50), Expect = 5.099e-23
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:   26 KYHKRYILPVVE 61
            K+HKRYILP  E
Sbjct:  129 KFHKRYILPAGE 140          
BLAST of EY660285 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 65/185 (35.14%), Postives = 82/185 (44.32%), Query Frame = 1
Query:   85 KSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTSTMPKKDQDKRTVSPHRFPLLRSGSIS------NRPKTPNARRPMXXXXXXXXXXXASDAKRRYPSEPRKSYSMRMPAERENCK--DFEQHPXXXXXXXXXXXXXXXXXXDDMLYTYLDEY 615
            K K +  S D EDDW+QFRNAV                                          +T PKK+QDKR VSPHRFPLLRSGS++      +RP TP+  R +            +   +RYPSEPR+S S+R+  E+E  K  + +Q P                  DD LYTYLDEY
Sbjct:  155 KLKNVEGSFDGEDDWNQFRNAVRATIRETPPPPVRKPILQSPSQRKPQRSATFSFSSI------ATAPKKEQDKRAVSPHRFPLLRSGSVAIRPSSISRPTTPSKSRAV------------TPTPKRYPSEPRRSASVRVAFEKEAQKEPEHQQQPSKSKRLLKALLSRRKTKKDDTLYTYLDEY 321          
The following BLAST results are available for this feature:
BLAST of EY660285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ABIL2_ARATH5.099e-2339.33Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH2.626e-1835.14Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660285 ID=EY660285; Name=EY660285; organism=Citrus sinensis; type=EST; length=860bp
AACTTCTACAAGGAGATTTTACTCCAAATATCATAAGCGCTACATCCTGC
CAGTCGTGGAGCAATAAATGGGGTTATCCGTACCAAGTCAAAGTACATTG
GATGCAGCCTAGATGATGAAGATGACTGGCATCAGTTTAGGAATGCTGTT
CGAGCTACAATTACTGAAACCCCAAGAGAAACACCTAGGGAAACCCCAGC
ATCTTCAGTTAGGAAAGGACGTTCTCCCTCACCTTCACCAAGACCTCCAC
AACGATCAGCCTCATTTTCCTTTACATCAACCATGCCCAAAAAAGATCAA
GATAAGCGTACAGTGTCACCACACCGGTTTCCACTTTTGCGTTCTGGTTC
AATCTCAAATAGGCCGAAAACCCCAAATGCTAGAAGGCCAATGACCCCAA
ATTCAAGTAGTCCGACAACTCCAAATGCTTCTGATGCAAAACGACGGTAC
CCTTCGGAGCCTCGAAAATCATATTCTATGCGTATGCCTGCTGAAAGGGA
AAACTGTAAAGACTTTGAACAACACCCCAGCAAAAGTAAACGGCTCCTTA
AGGCATTACTTAGTAGGCGCAAATCAAAGAAAGATGACATGCTATATACT
TATCTAGATGAATACTGATGAAATACATATACTGCTTGCAAAGAAAAGGG
CAGCAACCAGGGAAAGACATCCTGTACGGGAAAGGACTGTGAGATTGCAC
TCTGTTTGCCCTTTGTTTGAATGATTTTTTCCCCCCCCTTTATATAGTTT
TATGTATTACTAGAAGGAGACGGACATCATCCTTTAATATCTCTCTCAGC
CACCAATACTTGTAAAAATGGGGCAAAGTTGAAGCTTCCATTCAAGAATC
CGGCCAGGTG
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