EY660251

Overview
NameEY660251
Unique NameEY660251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660251_ssr265 microsatellite EY660251_ssr265:265..276. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.525e-74
Identity = 111/150 (74.00%), Postives = 129/150 (86.00%), Query Frame = 1
Query:  202 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVE 651
            RPA F +DF++ WSD H+ QI+GGRAIQL L  +SGCGFASK+QYLFGRVSM IKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPY VQTN++A+GKGDREQR NLWFDP+ D+H Y I WNH  IVFYVD+VPI V K  E
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNE 179          

HSP 2 Score: 61.6178 bits (148), Expect = 1.525e-74
Identity = 26/49 (53.06%), Postives = 31/49 (63.27%), Query Frame = 3
Query:  651 RAPFPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEG 797
            + P+P  QPMG YSTLWEA DW T+      NW + PF+AYYK    EG
Sbjct:  182 KVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEG 230          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.652e-67
Identity = 126/190 (66.32%), Postives = 147/190 (77.37%), Query Frame = 1
Query:  202 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVE--GLHFQ*TNPWGGIPRCGKHMTGEQKGGLETIIGDKPLF 765
            RPATF+EDFK  WS++H+RQ+E G+AIQLVL Q++GCGFASKR+YLFGRVSM IKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY VQTNI+A+GKGDREQR NLWFDP+ DYH YTILW+H HIVFYVDDVPI   K  E   + +  + P G      +      +GGLE I   K  F
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPF 220          

HSP 2 Score: 22.7126 bits (47), Expect = 1.652e-67
Identity = 10/26 (38.46%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  758 PFFCLLQTLGI*GWPXPGPANRVSHP 835
            PF+   +   I G P PGP    S+P
Sbjct:  219 PFYAYYKDFDIEGCPVPGPTFCPSNP 244          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.227e-51
Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  214 FLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            F ++++ +W+  H++ + GG  + LVL ++SG GF SK+ YLFG  SM +KL+ GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR  LWFDP   YH Y++LWN   IV +VDDVPI   K  + L
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDL 178          

HSP 2 Score: 47.3654 bits (111), Expect = 2.227e-51
Identity = 25/77 (32.47%), Postives = 38/77 (49.35%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEGGQXLDLQIGSLIPFLVEGYYSMPLRLWNRKS 890
            FP NQPM  YS+LW+A DW T+      +W   PF A Y     +G +       +  P  V+   +  +R W++K+
Sbjct:  182 FPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCE-------AATPQEVQVCNTKGMRWWDQKA 251          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.093e-50
Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  214 FLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            F  ++  TW+  H +Q+ GG  +QL+L + +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR  LWFDP+  YH Y++LWN + IVF+VD++PI V K  + L
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDL 180          

HSP 2 Score: 50.447 bits (119), Expect = 1.093e-50
Identity = 22/48 (45.83%), Postives = 26/48 (54.17%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEGGQ 803
            FP NQPM  YS+LW A DW T+      NW   PF A Y+    +G Q
Sbjct:  184 FPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQ 231          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.093e-50
Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  214 FLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            F +++  TW+  H+  + GGR +QL L + +G GF ++  YLFG  SM IKL+ GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR  LWFDP  DYH Y++LWN + I F+VDD PI V K  + L
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDL 178          

HSP 2 Score: 44.669 bits (104), Expect = 1.093e-50
Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEG 797
            +P +QPM  YS+LW A DW T+      +W + PF A Y+    +G
Sbjct:  182 YPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDG 227          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.420e-50
Identity = 81/148 (54.73%), Postives = 104/148 (70.27%), Query Frame = 1
Query:  214 FLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            F  ++  TW+  H +Q  GG  +QL+L + +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR  LWFDP+  YH Y+ILWN + IVF+VD++PI   K  + L
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDL 181          

HSP 2 Score: 51.2174 bits (121), Expect = 2.420e-50
Identity = 23/48 (47.92%), Postives = 26/48 (54.17%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEGGQ 803
            FP NQPM  YS+LW A DW T+      NW   PF A YK    +G Q
Sbjct:  185 FPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQ 232          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.985e-50
Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  214 FLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            F ++++ +W+  H++ + GG    L+L ++SG GF SK+ YLFG  SM ++L+ GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR  LWFDP   YH Y++LWN + IV +VDDVPI   K  + L
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDL 179          

HSP 2 Score: 48.521 bits (114), Expect = 6.985e-50
Identity = 21/46 (45.65%), Postives = 25/46 (54.35%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEG 797
            FP NQPM  YS+LW+A DW T+      NW   PF A Y     +G
Sbjct:  183 FPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDG 228          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 4.465e-49
Identity = 80/146 (54.79%), Postives = 101/146 (69.18%), Query Frame = 1
Query:  211 TFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSK 642
            +F ++F + WS+ H    + G    L L  ++GCGF +K  Y FG  SM +KL+ GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPI V K
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYK 169          

HSP 2 Score: 46.9802 bits (110), Expect = 4.465e-49
Identity = 21/63 (33.33%), Postives = 34/63 (53.97%), Query Frame = 3
Query:  636 FQNSGRAP----FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKHLVFEGGQXLD 812
            ++NS + P    FP  +PM  +S++W A DW T+      +W++ PF + YK    EG +  D
Sbjct:  168 YKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKD 230          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.820e-49
Identity = 76/150 (50.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:  208 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGL 657
            + F ++F +TW D   +   GG  + L L Q SG GF SK++YLFGR+ M +KL+ G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PI V    E L
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKL 174          

HSP 2 Score: 50.0618 bits (118), Expect = 5.820e-49
Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  657 PFPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYK 779
            PFP +QPM  YS+LW A DW T+      +W + PF AYY+
Sbjct:  177 PFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 217          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 7.588e-49
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 1
Query:  211 TFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMVSKTVEGLHFQ 666
            TF  +F +TW D   + +  G  + L L + SG GF +K++YLFG++ M +KL+PG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PY + TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+   K ++ +  Q
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQ 179          

HSP 2 Score: 39.2762 bits (90), Expect = 7.588e-49
Identity = 16/41 (39.02%), Postives = 23/41 (56.10%), Query Frame = 3
Query:  660 FPMNQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPFFAYYKH 782
            +P  QPM  YS+LW A  W T+      +W + PF A Y++
Sbjct:  180 YPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRN 220          
The following BLAST results are available for this feature:
BLAST of EY660251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH7_ARATH1.525e-7474.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH1.652e-6766.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.227e-5154.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.093e-5054.73Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH_WHEAT1.093e-5055.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH2.420e-5054.73Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_SOLLC6.985e-5052.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH4.465e-4954.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH5.820e-4950.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH7.588e-4951.32Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660251 ID=EY660251; Name=EY660251; organism=Citrus sinensis; type=EST; length=890bp
TCTGGTACCCTGCGGTACTCTTCCGGAATTCTTCGTAGGCGACGTGTCCG
TAACCACCTGCCTAAAAAAAGTTTTCTTTCTAATTAGTAACAGATAATAT
TTTATTGTACGTCTCGTTCTACAAATATGGCTATCCTAAGAAATGCAATA
GCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGG
GCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCC
ATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTACACCAA
AATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGT
AAGCATGTTTATCAAGCTCCTTCCTGGAGACTCTGCTGGAACTGTCACTG
CATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTT
GAGTTCCTGGGAAACCGAACGGGTCAGCCTTACCCGGTCCAGACCAATAT
CTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGCGAACCTCTGGTTTG
ACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACCAT
ATTGTCTTCTATGTGGATGATGTGCCCATCATGGTTTCCAAAACAGTGGA
AGGGCTCCATTTCCAATGAACCAACCCATGGGGGGGTATTCCACGCTGTG
GGAAGCACATGACTGGGGAACAAAAAGGTGGTCTTGAAACAATAATTGGA
GACAAACCCCTTTTTTTGCTTATTACAAACACTTGGTATTTGAGGGTGGC
CAGNTCCTGGACCTGCAAATCGGGTCTCTCATCCCGTTTCTGGTGGAGGG
CTATTATTCCATGCCTCTCCGCCTGTGGAACAGAAAATCA
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