EY660250

Overview
NameEY660250
Unique NameEY660250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.309e-25
Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 3
Query:  141 ESDVCEIDTRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGF-NANRRKSGLVQIRKRESI-REGCRAMILVKREKPGRWVVTKFEKEHNHLLL 488
            E + C++    EPY+G+ FESE+AAK FY+ YARR GFSTR+ SSR+S RDG+II R   C KEGF N N +++   +I++  +I R GC+A + VK +  G+W+V+ F K+HNH L+
Sbjct:   62 EEEACDL-LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.377e-15
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 3
Query:  156 EIDTRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLL---LSSGKDGPSPDEKDR 530
            E D+  EPY G+ F++ + A+ +Y+ YA R GF  R     +S  DG++ SR   C+KEGF  N               R GC A I V+R   G+WV+ + +KEHNH L   +   +  P P  + R
Sbjct:   21 EGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEEAQTTPRPSVQQR 134          

HSP 2 Score: 74.7146 bits (182), Expect = 8.453e-13
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 3
Query:  174 EPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNH 479
            EPY G+ F S + A  FY  YA   GF  RI    +S+ DGSI SR   C+KEGF              +   R GC A + +KR+  G W+V +  K+HNH
Sbjct:  189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF--------------QHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNH 276          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  174 EPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLLSSG 497
            EPY G+ F++ + A+ FY+ YA R GF  R     +S  DG++ SR   C+KEGF  N               R GC A I V+R   G+WV+ + +KEHNH L   G
Sbjct:   42 EPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCTAFIRVQRRDTGKWVLDQIQKEHNHELGGEG 135          

HSP 2 Score: 73.559 bits (179), Expect = 1.883e-12
Identity = 40/105 (38.10%), Postives = 53/105 (50.48%), Query Frame = 3
Query:  165 TRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNH 479
            T  EPY G+ F S + A  FY  YA   GF  RI    +S+ DGSI SR   C++EGF              +   R GC A + +KR+  G W+V +  K+HNH
Sbjct:  207 TGTEPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF--------------QHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNH 297          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  147 DVCEIDTRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLLSS-------GKDGPSPDEKDRKIRELSME 554
            +V +  T  E   GM FES++AA  FY EYAR  GF   I +SR+S+R G  I   +AC++  F   R K+    I  R   + GC+A + +KR++  +WV+  F KEHNH +          GK+ P+     +K  +L++E
Sbjct:   28 NVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSR--FGTKREKA--TAINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPDDFYVSVRGKNKPAGALAIKKGLQLALE 166          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.031e-15
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  162 DTRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIRE-GCRAMILVKREKPGRWVVTKFEKEHNHLLL 488
            D   EP  G+ F++ +AA IFY EYA+  GF+T I +SR+S++    I    AC++ G       SG     +R ++++  C+A + VKR   G+W++ +F K+HNH LL
Sbjct:   46 DLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSG--SSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.304e-13
Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = 3
Query:  138 GESDVCEIDTRR----EPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGL-------VQIRK-----RESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLLSSGKDGPSPDEKDRKIRELS 548
            GE    ++D  R    E  EG  FES++ A  FY EYA   GF+T I +SR+S   G  I     C + G       +GL        Q RK     R S +  C+A + VKR + GRWVV    KEHNH + +   D        RK+ +L+
Sbjct:    4 GECSNVQLDDHRKNNLEIDEGREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADSLRELSGRRKLEKLN 156          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS10_ARATH (Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana GN=FRS10 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.225e-13
Identity = 52/182 (28.57%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  156 EIDTRREPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKRE---KPGRWVVTKFEKEHNHLLLSSGKDGPSPDEKDRKIRELSME----LHRANQKLEACQEQLQIVMSYIEEHAKCLSKTVEEAVKDIQK 680
            + DT   PY G +F ++D A  +Y  +AR++GFS R   S +S+  G +  R   C + GFN  R+K+ +   R+R+S+R GC   + + +E       W V++F   HNH LL   +    P    RKI++   E    L +A   +    + L++    +      + K V   V+  +K
Sbjct:   48 QYDTVFTPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLP--AYRKIQQSDQERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKK 226          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  174 EPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLLSS 494
            EP  GM F SE  AK FYDEY+R+ GF+++++       DGS+  R   C+     + RR S            E C AM+ ++ +   +WVVTKF KEH H L SS
Sbjct:   48 EPCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLP----RTDGSVSVREFVCSSSSKRSKRRLS------------ESCDAMVRIELQGHEKWVVTKFVKEHTHGLASS 138          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 3
Query:  174 EPYEGMVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEG--------FNANRRKSGLV----QIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLLSSGKDGPSPDEKDRKI 536
            EP  GM FES   A  FY EY+R  GF+T I +SR+S+     I    AC++ G        FN  R +           +R   +  C+A + VKR   G+WV+  F +EHNH LL +     +  E+ RKI
Sbjct:   69 EPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPA----QAVSEQTRKI 197          
BLAST of EY660250 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.638e-11
Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = 3
Query:  189 MVFESEDAAKIFYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGLVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLL 488
            M FE+ + A +FY +YA+  GF T  +SSR+S      I    +C + G       +    I  R S + GC+A + VKR   G+W V  F KEHNH LL
Sbjct:    1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDA----INPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL 96          
The following BLAST results are available for this feature:
BLAST of EY660250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FRS5_ARATH3.309e-2549.15Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FRS7_ARATH2.377e-1535.16Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis tha... [more]
FRS12_ARATH3.104e-1538.89Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis th... [more]
FRS2_ARATH5.295e-1535.66Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis tha... [more]
FAR1_ARATH9.031e-1537.27Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
FRS1_ARATH1.304e-1334.64Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis tha... [more]
FRS10_ARATH2.225e-1328.57Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabi... [more]
FRS3_ARATH8.453e-1339.25Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]
FHY3_ARATH1.104e-1235.34Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidops... [more]
FRS4_ARATH4.638e-1138.00Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660250 ID=EY660250; Name=EY660250; organism=Citrus sinensis; type=EST; length=938bp
TCTGGTACCCTGCAGTACTGGTCCGGAATTCTTTCATAGACCCACGTGTC
CGTAAAGAAATTACCATGGATTTGGTTGCCCCTGCAGAAGAAACCCCTGC
TGAAGAGAAAACTNGTTCAATCGAAAGTCCTACATGAGGTGAATCTGATG
TTTGTGAAATTGACACAAGACGGGAACCATATGAGGGTATGGTGTTTGAG
TCGGAAGATGCTGCCAAAATATTCTATGATGAGTATGCCAGACGCGCAGG
ATTTTCGACACGAATTATTTCATCGCGTAAGTCAGAGCGTGATGGATCGA
TCATCTCTCGCCATCTTGCATGTAATAAAGAGGGATTTAATGCTAACCGT
CGGAAGTCCGGACTGGTTCAGATTCGAAAGCGAGAGAGCATACGGGAAGG
TTGCAGGGCAATGATATTGGTGAAGAGAGAGAAGCCAGGGAGGTGGGTTG
TGACGAAATTTGAGAAGGAGCATAATCACCTACTATTAAGTTCTGGAAAG
GATGGGCCATCCCCAGATGAGAAAGATAGAAAAATTCGAGAGCTATCTAT
GGAGTTGCATCGTGCAAATCAAAAGTTGGAAGCATGCCAAGAACAGCTGC
AAATAGTTATGTCGTATATCGAGGAACACGCTAAGTGTCTGTCGAAAACA
GTTGAGGAGGCAGTTAAGGATATCCAAAAGGTCGAATCTGGAAAACAAAA
GGAACTCTAGGTAAGCTGTGGCATTCCTGTAACTGATTTTATGCCTAGAA
TTGGTTAACATTTTCAATTTCTAGAAGAGTATTGTGTATAGTAGTGTGAC
AAAAGCGTTTTGTTAATTTTAGCTGAGCTGTAACATTTACAAAGATCTAC
ATTCCTATTTTTTTTTGAGGAGGGATTATTAATTTAGCTGTGCATTGAAT
TTGACCGGTGATTTAGGAAATCCTATGTTTTTCTATCC
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