EY660201

Overview
NameEY660201
Unique NameEY660201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660201_ssr336 microsatellite EY660201_ssr336:336..355. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1691 contig Csv1_Contig1691:66..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.253e-51
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            R+ ELPPVDMFVTTAD   EPP+I VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV++RAPF YF
Sbjct:   88 RVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF 174          

HSP 2 Score: 73.1738 bits (178), Expect = 1.253e-51
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 1
Query:   25 PSYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            P  E++ HK+ + RA                          W +AFLCE+CFTF+W+LI N KW+P  YKTYP+RL ER
Sbjct:   10 PLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDER 88          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.632e-48
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            R+ +LP VDMFVTTAD   EPPI+  NT+LSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF
Sbjct:   88 RVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYF 174          

HSP 2 Score: 66.2402 bits (160), Expect = 4.632e-48
Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 1
Query:   25 PSYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            P  EK+ +KN + R                       +   W +AFLCES F+FIW+LI + KW+P +YK+YP+RL ER
Sbjct:   10 PLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDER 88          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.536e-47
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            R+ +LP VDMFV TAD   EPPI+ VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF
Sbjct:   88 RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYF 174          

HSP 2 Score: 63.1586 bits (152), Expect = 8.536e-47
Identity = 29/79 (36.71%), Postives = 38/79 (48.10%), Query Frame = 1
Query:   25 PSYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            P YE + +K+   RA                      +G  W +AFLCESCF+F+W+L    KW+P   K YP RL ER
Sbjct:   10 PLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDER 88          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.890e-46
Identity = 73/115 (63.48%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK---VKIC 707
            R+ +LP VDMFV TAD   EPPII VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF              +DWK MK   VK+C
Sbjct:   88 RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLC 201          

HSP 2 Score: 57.7658 bits (138), Expect = 1.890e-46
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query:  148 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            W +AFLCESCF+F+W++I   KW+P   K YP RL ER
Sbjct:   51 WLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDER 88          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.397e-42
Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK 695
            R+ +LP VDMFV TAD   EPPI+ V+TVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN ++RAP RYF              +DW+  K
Sbjct:   88 RVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYEFNRDWEKTK 195          

HSP 2 Score: 49.2914 bits (116), Expect = 3.397e-42
Identity = 24/79 (30.38%), Postives = 34/79 (43.04%), Query Frame = 1
Query:   25 PSYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            P  E++ + N + RA                      +   W +AF CESCF  + +LI   KW+P   K +P RL ER
Sbjct:   10 PLCERISYTNYFLRAVYLTVLGLFFSLLLHRIRHTSEYDNVWLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDER 88          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 4.792e-41
Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 3
Query:  372 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK 695
            RI ELP VDMFVTTAD  LEPP++TVNTVLSLLA+DYP    KLACYVSDD CSPL  Y+L EA++FA+ WVPFC+++ V +RAPFRYF              +DW  MK
Sbjct:   87 RIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGPADGKFLEDWTFMK 196          

HSP 2 Score: 48.521 bits (114), Expect = 4.792e-41
Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 1
Query:  157 AFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            A  CE+ FTF+W+L VN KW+P+ + T+P+ L ER
Sbjct:   53 ALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAER 87          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.536e-35
Identity = 78/150 (52.00%), Postives = 96/150 (64.00%), Query Frame = 3
Query:  279 LALIISASFAIVFVILQVXXXXXXXXCVRLN----RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK---VKIC 707
            LA    + F++V++I              +N    R+ +LP +DMFV TAD   E PIITVNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF              +DWK MK   VK+C
Sbjct:   53 LAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLC 201          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.946e-30
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 3
Query:  381 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            +L PVD+FV+T D   EPPIIT NT+LS+LAVDYPV+K++CYVSDD  S L F +L E S+FA+ WVPFCKKYNV+ RAP  YF
Sbjct:  290 KLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYF 373          

HSP 2 Score: 35.4242 bits (80), Expect = 2.946e-30
Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  148 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  244 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMR 281          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.992e-30
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3
Query:  381 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            +L PVD FV+T D   EPP++T NTVLS+L+VDYPV K++CYVSDD  + L F +L E S+FAK WVPFCKK+N++ RAP  YF
Sbjct:  354 QLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYF 437          

HSP 2 Score: 36.1946 bits (82), Expect = 4.992e-30
Identity = 18/44 (40.91%), Postives = 23/44 (52.27%), Query Frame = 1
Query:  133 NHGFA-WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            N  FA W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  302 NDAFALWLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLR 345          
BLAST of EY660201 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.501e-30
Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 3
Query:  381 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 632
            +L PVD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FA+ WVPFCKKY+++ RAP  YF
Sbjct:  344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427          

HSP 2 Score: 36.5798 bits (83), Expect = 6.501e-30
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 1
Query:  148 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 261
            W L+ +CE  F   WIL    KW+P+  +TY  RL  R
Sbjct:  298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALR 335          
The following BLAST results are available for this feature:
BLAST of EY660201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB4_ARATH1.253e-5178.16Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH4.632e-4873.56Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB2_ARATH8.536e-4774.71Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB6_ARATH1.890e-4663.48Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB1_ARATH3.397e-4261.11Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLH1_ORYSJ4.792e-4160.91Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLB5_ARATH7.536e-3552.00Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CESA4_ARATH2.946e-3065.48Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA6_ORYSJ4.992e-3060.71Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA2_ORYSJ6.501e-3060.71Probable cellulose synthase A catalytic subunit 2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660201 ID=EY660201; Name=EY660201; organism=Citrus sinensis; type=EST; length=775bp
TTCGTCGACCCACGCGTCCGGTCTCCCTCTTACGAAAAAGTTTTTCATAA
AAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTAT
GTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGG
TTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCAT
CGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTC
TCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCAT
CATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACA
CACACATGTGTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACAT
GTTTGTGACAACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAA
ACACAGTGCTGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCT
TGCTATGTTTCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGT
TGAAGCTTCTAAATTCGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATA
ATGTTCAAATTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCC
GATTCCAGTTCAGGGGAACTCCTGCAAGACTGGAAAAACATGAAGGTAAA
GATATGTTNAAGTTACATGTATCTGCTCTACACANAAATTAAAATCATAT
GACACAATAAAAAAAAAAAAAAGGG
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