EY660197

Overview
NameEY660197
Unique NameEY660197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 8.573e-69
Identity = 146/274 (53.28%), Postives = 188/274 (68.61%), Query Frame = 2
Query:   17 SADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRGSHVMLSG*ILIHNMCH*RKTIMIFLRLEGNKLKKRCKRALGKRKSLVQYPEDQASYREVLNRCQRFPGNK 832
            +ADLA  NGH+GISGFLAE           + D+ ++ + + S AKAV TV+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+  IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ R +YR IIWSVG+LEK+ILRWRRKGSGLRG                 ++    FL+    + ++R ++AL + KS+ QYPE +A YR +L   + F  N+
Sbjct:  737 AADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLKEGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENE 1009          
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.868e-64
Identity = 142/281 (50.53%), Postives = 185/281 (65.84%), Query Frame = 2
Query:   17 SADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRGSHVMLSG*IL-----IHNMCH--*RKTIMIFLRLEGNKLKKRCKRALGKRKSLVQYPEDQASYREVLNRCQRFPGNK 832
            +ADLA +NGH+GISGFLAE           + DS ++        KAVQTVSE+TA P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS + A+S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ R +YR +IWSVG+LEK+ILRWRRKG+GLRG         +     +  +C    ++    +L+    + ++R ++AL + KS+VQYPE +  YR +L   + F  N+
Sbjct:  688 AADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSERTAAPMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLAVSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIPQEDEYDYLKEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENE 967          
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.121e-51
Identity = 125/267 (46.82%), Postives = 167/267 (62.55%), Query Frame = 2
Query:   20 ADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE-LGISYEHALSLVAAKSLRP--VQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRGSHVMLSG*ILIHNMCH--*RKTIMIFLRLEGNKLKKRCKRALGKRKSLVQYPEDQASYREVLN 805
            +DLA +NGHKGI+G+L+E           +ND            K  +TV E   +P++        SL DSLTA+ NATQAA RIHQ+FR QSFQ+KQL EF ++ LG+S E ALS++A K+ +      D    +AAI+IQ KFRG+K RK++L+ RQRI+KIQAHVRG+Q R  YR IIWSVG+LEKVILRWRRKG+GLRG         L+  M     ++    F +    + + R ++AL + KS+VQYPE +  YR +LN
Sbjct:  738 SDLAYANGHKGIAGYLSEYALRAHVSLLSLND------------KNAETV-EMAPSPSSS-------SLTDSLTAVRNATQAAARIHQVFRAQSFQKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDDSVQAAAIRIQNKFRGYKGRKDYLITRQRIIKIQAHVRGYQFRKNYRKIIWSVGVLEKVILRWRRKGAGLRG----FKSEALVEKMQDGTEKEEDDDFFKQGRKQTEDRLQKALARVKSMVQYPEARDQYRRLLN 980          
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.527e-33
Identity = 86/208 (41.35%), Postives = 127/208 (61.06%), Query Frame = 2
Query:   17 SADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFN-----NELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRG 622
            +A +A+SNGHKG++G+L+E           + ++ +     +    K + ++SE++  P+ + D+   +SLKD+L A+ NA QAA RI   FR  SF++++  E        E G+  E    + A   L   +G    +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q R  Y+ I W+V IL+KV+LRWRRKG GLRG
Sbjct:  723 AASIAASNGHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQS--PSGNEDQ---VSLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSKLTFGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRILDKVVLRWRRKGVGLRG 924          
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.693e-24
Identity = 84/266 (31.58%), Postives = 138/266 (51.88%), Query Frame = 2
Query:   17 SADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTV-SEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRGSHVMLSG*ILIHNMCH*RKTIMIFLRLEGNKLKKRCKRALGKRKSLVQYPEDQASYREV 799
            +ADLA   G+ G++ FLAE          +  D    G    +I+  ++T+ +EK++ P N N+E    SLKD+L A   A +AA RI   FR    + R     F ++     E A +++AA  ++    +       +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R +Y+ I WSVG+LEK ILRWR K  G RG  V         +     + +  F +    + ++R +R++ K +++ +  + Q  YR +
Sbjct:  654 AADLAQQKGYDGLAAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANEEEQ--SLKDTLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAMKIQHAFRNFEVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEKAILRWRLKRKGFRGLQVSQP------DEKEGSEAVEDFYKTSQKQAEERLERSVVKVQAMFRSKKAQQDYRRM 898          
BLAST of EY660197 vs. ExPASy Swiss-Prot
Match: CMTA6_ARATH (Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.719e-23
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = 2
Query:   17 SADLASSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ--RKQLTEFNNELGISYEHALSLVAAKSLRPV---QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARIKYRPIIWSVGILEKVILRWRRKGSGLRGSHV 631
            +ADLA  NG+ G++ +LAE          K+  +   G LE   A   + +++ T          D  SLKD+L A   A +AA RI   FR ++ +  R  + +F N+     E A S++AA  ++             AA +IQ +F+ WK R+E+L +R++ ++IQA  RG QAR +Y+ I+WSVG+LEK +LRWR+K  G RG  V
Sbjct:  568 AADLAQQNGYDGLAAYLAEKCLVAQFRDMKIAGNIT-GDLE---ACKAEMLNQGTLP-------EDEQSLKDALAAYRTAAEAAARIQGAFREKALKAARSSVIQFANK----EEEAKSIIAAMKIQNAFRKYDTRRKIEAAYRIQCRFQTWKIRREYLNMRRQAIRIQAAFRGLQARRQYKKILWSVGVLEKAVLRWRQKRKGFRGLQV 762          

HSP 2 Score: 22.3274 bits (46), Expect = 4.719e-23
Identity = 7/20 (35.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  676 EDDYDFFKVGRKQTEEKVQK 735
            E   DF+K  ++Q EE++++
Sbjct:  771 EAQEDFYKTSQRQAEERLER 790          
The following BLAST results are available for this feature:
BLAST of EY660197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CMTA2_ARATH8.573e-6953.28Calmodulin-binding transcription activator 2 OS=Ar... [more]
CMTA1_ARATH4.868e-6450.53Calmodulin-binding transcription activator 1 OS=Ar... [more]
CMTA3_ARATH2.121e-5146.82Calmodulin-binding transcription activator 3 OS=Ar... [more]
CMTA4_ARATH1.527e-3341.35Calmodulin-binding transcription activator 4 OS=Ar... [more]
CMTA5_ARATH1.693e-2431.58Calmodulin-binding transcription activator 5 OS=Ar... [more]
CMTA6_ARATH4.719e-2335.71Calmodulin-binding transcription activator 6 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660197 ID=EY660197; Name=EY660197; organism=Citrus sinensis; type=EST; length=957bp
TTGCTCGACCCACGCGTCCGCAGACCTAGCTTCTAGCAATGGACACAAAG
GAATCTCGGGTTTTCTTGCGGAGTCTTCGTTAACCAGCCTTCTGTTATCC
CTTAAAATGAACGATTCAGCAGACGATGGTGCCTTAGAAGATTCTATAGC
TAAAGCTGTACAAACAGTTTCAGAGAAGACAGCTACTCCTGCTAATGATA
ATGATGAGTCAGATGTACTATCACTGAAGGATTCATTAACTGCCATCTGT
AATGCTACTCAAGCTGCTGACCGTATACATCAAATTTTCAGGATGCAATC
ATTCCAGCGGAAGCAGTTAACTGAGTTTAATAATGAATTAGGTATATCAT
ATGAGCATGCTCTTTCACTTGTGGCTGCTAAGTCACTCAGGCCTGTACAA
GGTGATGGTCTAGCCCATTCTGCCGCTATACAGATCCAGAAGAAGTTTCG
TGGTTGGAAGAAGAGGAAAGAATTCCTATTAATTAGGCAAAGGATTGTTA
AAATTCAGGCACATGTGAGAGGACATCAGGCAAGAATAAAATATAGGCCA
ATCATCTGGTCAGTTGGAATCCTGGAAAAGGTCATTTTGCGCTGGAGACG
TAAAGGCAGCGGTTTGCGTGGATCCCACGTGATGCTCTCGGGATGAATTC
TAATCCACAACATGTGCCATTGAAGGAAGACGATTATGATTTTTTTAAGG
TTGGAAGGAAACAAACTGAAGAAAAGGTGCAAAAGGGCACTGGGCAAAAG
GAAGTCATTGGTTCAGTATCCTGAAGACCAAGCTTCATACCGTGAGGTGC
TGAACCGGTGCCAAAGGTTCCCGGGAAACAAACGGGAGCCCAAATGGTTC
CCAATGGCTTGGAAAATTACCTGATGGAACCCCCATCCGATTGGATTGGC
TCCCTTTTGGAAGAAGCACCCTCCGGCCTGGGGCATTTGAAGGGCCCGGA
TTCCCCA
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