EY660196

Overview
NameEY660196
Unique NameEY660196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660196 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 82/247 (33.20%), Postives = 118/247 (47.77%), Query Frame = 3
Query:   30 AQVRYLHWYGYPLKSLPTNIHPEKLVSIEMPHGNIQQLWDSVQHN--------GKLKQIISRASNFFTKSP----------------NHSLTL-----HLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSGLSALYLDHCXXXXXXXXXXXXXXXXXXIYLR*CSSLKSLPDELGNLEALNSLNAEGTAIREVPLSIVCLNNFDGL 683
            +++R LHW  YPL SLP + +PE LV + +P    ++LW   +           KLK++    S+  TK P                N  L+L     +L KLV LNL  C  L  +P+ +  LE L+ L+L GCSKL   PEIS   N++ +Y+ GT I+E+PSSI+ L  L  L L++                   + L  C SL+  PD    ++ L  L+   T I+E+P SI  L   D L
Sbjct: 1205 SKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISP--NVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDEL 1448          
BLAST of EY660196 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16
Identity = 82/268 (30.60%), Postives = 118/268 (44.03%), Query Frame = 3
Query:   33 QVRYLHWYGYPLKSLPTNIHPEKLVSIEMPHGNIQQLWDSVQHNGKLKQIISRASNFFTKSPNHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSS------------IECLSGLSALYLDHCXXXXXXXXXXXXXXXXXXIYLR*CSSLKSLPD---------ELGNLEALNSLNA----------EGTAIREVP-----LSIV-----CLNNFDGLQNLTSLYLTD 713
            ++R LHW  YPLKSLP N  P  LV I MP+  +Q+LW   ++   L+ I    S+      +    L  + L  ++L  C  L+  PA   RL  L+ ++L GC K+K++ EI    NIE ++L GT I  LP S            +  + GLS   L+                    + L+ CS L+SLP+         +L    +LNS+             GTAIREVP     L I+     CL +   + NL  L + D
Sbjct:  555 ELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDD---LLKAENLEVIDLQGCTRLQNFPAA-GRLLRLRVVNLSGCIKIKSVLEIPP--NIEKLHLQGTGILALPVSTVKPNHRELVNFLTEIPGLSE-ELERLTSLLESNSSCQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYLGGTAIREVPQLPQSLEILNAHGSCLRSLPNMANLEFLKVLD 815          
BLAST of EY660196 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16
Identity = 82/326 (25.15%), Postives = 139/326 (42.64%), Query Frame = 3
Query:   60 YPLKSLPTNIHPEKLVSIEMPHGNIQQLWDSVQHNGKLKQIISRASNFFTKSPNHSLTLHLD---------------------KLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEV-MYLNGTAIEELPSSI-ECLSGLSALYLDHCXXXXXXXXXXXXXXXXXXIYLR*CSSLKSLPDELGNLEALNSLNAEGTAIREVPLSIVCLNNF--------------------DGLQNLTSLYLTDCGIT--XXXXXXXXXXXXXXXXXXKKHFERIPESIIHLF*VGIS*IELL*EASILTKLPCNLSEL 902
            YP +S P+    + LV +++ H +++ LW   +H   L++I    S   T++P+ +   +L+                     K++ L LN+CKSL+  P     +E L+ L L  C  L+ LPEI      E+ +++ G+ I ELPSSI +  + ++ L L +                   + +  CS L+SLP+E+G+L+ L   +A  T I   P SI+ LN                      +GL +L  L L+ C +                     + +FE +P SI  L  +    ++     + L +LP  L+EL
Sbjct:  584 YPWESFPSTFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKSLKRFPC--VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNEL 907          
BLAST of EY660196 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15
Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 3
Query:   33 QVRYLHWYGYPLKSLPTNIHPEKLVSIEMPHGNIQQLWDSVQHNGKLKQIISRASNFFTKSPN---------------------HSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSGLSALYLD 479
            Q+R LHW  YPL+  P++  PE LV + M H  +++LW  VQ    L+ +   +S      PN                      S   +L  L+ L ++ CK L I+P  I  L  L+ L    C++L+T PEIS+  NI ++ L GTAI E+P S++  S +  + ++
Sbjct:  587 QLRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNI-NLPSLEVLHFRYCTRLQTFPEIST--NIRLLNLIGTAITEVPPSVKYWSKIDEICME 753          
BLAST of EY660196 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.363e-14
Identity = 76/247 (30.77%), Postives = 107/247 (43.32%), Query Frame = 3
Query:   36 VRYLHWYGYPLKSLPTNIHPEKLVSIEMPHGNIQQLWDSVQHNGKLKQIISRASNFFTKSPNHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSS---------------IECLSGLSALY---LDHCXXXXXXXXXXXXXXXXXXIYLR*CSSLKSLPDELGNLEALNSLNAEGTAIREVPLSIVCLNNFDGLQNLTSLYLTDCGI 722
            +R LHW  YPL+ LP N  P  LV I MP+  +++LW   +    LK I    S       +    L    L  ++L  C  L+  PA   +L  L+ ++L GC+++K+ PEI    NIE + L GT I ELP S               I  LSG+S L    L                     + L  CS L+SLP+ + NLE L +L+  G +  E       +  F   +NL  LYL    +
Sbjct:  549 LRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDD---LLKAQNLEVVDLQGCTRLQSFPA-TGQLLHLRVVNLSGCTEIKSFPEIPP--NIETLNLQGTGIIELPLSIVKPNYRELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSLPN-MVNLELLKALDLSGCSELET------IQGFP--RNLKELYLVGTAV 780          
The following BLAST results are available for this feature:
BLAST of EY660196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WRK19_ARATH1.145e-2233.20Probable WRKY transcription factor 19 OS=Arabidops... [more]
WRK52_ARATH1.602e-1630.60Probable WRKY transcription factor 52 OS=Arabidops... [more]
TMVRN_NICGU1.602e-1625.15TMV resistance protein N OS=Nicotiana glutinosa GN... [more]
Y4117_ARATH3.946e-1531.76Putative disease resistance protein At4g11170 OS=A... [more]
WRK16_ARATH4.363e-1430.77Probable WRKY transcription factor 16 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660196 ID=EY660196; Name=EY660196; organism=Citrus sinensis; type=EST; length=918bp
TTCGTCGACCCACGCGTCCGCCTGGATTTGCTCAAGTGAGGTATCTTCAC
TGGTATGGATATCCACTAAAATCATTACCGACAAATATTCATCCAGAGAA
ACTTGTTTCAATTGAAATGCCTCATGGTAATATTCAACAACTTTGGGATA
GTGTCCAGCATAATGGTAAGTTAAAGCAGATAATAAGCCGGGCCTCTAAT
TTTTTCACCAAATCTCCAAACCACTCGTTGACTCTGCATCTGGACAAGCT
AGTTAACCTCAATCTAAACAATTGCAAAAGCTTGAGAATTCTTCCAGCTG
GAATATTTCGTTTGGAATTTCTTAAAGAACTTGATCTTTGGGGTTGCTCA
AAACTAAAAACGCTTCCAGAGATCTCATCAGCTGGTAATATAGAAGTGAT
GTATTTAAATGGAACTGCAATTGAAGAATTGCCTTCATCCATAGAATGTC
TATCTGGGCTTTCGGCCTTATACCTTGATCATTGTAAAAGGCTGAAGAGT
CTCCCAAGCAGCCTATGTAAGTTGAAATCTCTGAATTCTATTTATCTCAG
GTAGTGCTCAAGTCTTAAGAGTTTGCCCGATGAACTTGGAAATTTAGAAG
CTTTGAACAGTTTGAATGCTGAAGGAACTGCTATAAGAGAAGTGCCGTTG
TCCATTGTTTGTTTGAACAATTTTGATGGCTTGCAAAATCTAACGTCTTT
ATATCTAACTGATTGCGGCATCACGGAGTTACCTGAAAATCTCGGTCAGT
TATCTTTATTACTTGAATTGTATCTAGAGAAAAAACATTTTGAGAGAATA
CCAGAGAGCATCATACATCTTTTCTAAGTTGGCATATCTTAAATTGAGTT
ATTGTGAGAAGCTTCAATCCTTACAAAGCTTCCATGCAATCTAAGTGAGT
TAGATGCCATCATTGCCC
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