EY660181

Overview
NameEY660181
Unique NameEY660181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3772 contig Csv1_Contig3772:31..913. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 68/129 (52.71%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  458 DQGSLPTLTSKRHKADLSIS-AKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL--QSMPAAKV-----QELEQYSLRNRGLCLVPISCTAGVAXSNGADIWRPSRPLH 820
            DQ   P    KR++   S+  AK RKE+LGERI ALQQLVSPYGKTD ASVL EAM YI+FL +Q++VL +PYL   S+    V       ++   LR+RGLCLVP+S T  V  SNGAD W P+   H
Sbjct:  132 DQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWSPATMGH 260          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.403e-22
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 2
Query:  485 SKRHKADLSIS--AKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL---------QSMPAAKVQELEQYSLRNRGLCLVPISCTAGVAXSNGADIWRPS 808
            +KR K++ +    A +RKEK+G+RI ALQQLVSP+GKTD ASVL EA+EYI+FLH+QV  LS PY+         QS  + +++  E+  LR+RGLCLVP+S T  V      D W P+
Sbjct:  330 AKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPT 448          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.193e-21
Identity = 57/107 (53.27%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  521 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAAKVQ-----------ELEQYSLRNRGLCLVPISCTAGVAXSNGADIWRPS 808
            K RKE L ++I +LQQLVSP+GKTDTASVL EA+EYI+FLH+QV VLS PY++   + + Q           E E + LR  GLCLVPIS T  VA    AD W P+
Sbjct:  280 KVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTPT 386          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 59/138 (42.75%), Postives = 70/138 (50.72%), Query Frame = 2
Query:  521 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQS------------------MPAAKVQELEQY------------------------SLRNRGLCLVPISCTAGVAXSNGADIWRPS 808
            K RKEKLG RI +L QLVSP+GKTDTASVL EA+ YI+FLH Q++ LS PY  +                   P    Q + +Y                         LR+RGLCLVPISCT  V   NGAD W P+
Sbjct:  219 KVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNGADYWAPA 356          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 2
Query:  521 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQS------------MPAAKVQELEQYSLRNRGLCLVPISCTAGVAXSNG 787
            K RKEKLG+RI ALQQLVSP+GKTDTASVL EA+ YI+FL  Q++ LS PY+++              + +  E E   LR+RGLCLVP+SC   V    G
Sbjct:  332 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGG 432          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 57/138 (41.30%), Postives = 69/138 (50.00%), Query Frame = 2
Query:  521 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAAKVQ------------------------------------------ELEQYSLRNRGLCLVPISCTAGVAXSNGADIWRPS 808
            K RKEKLG RI AL QLVSP+GKTDTASVL EA+ YI+FL  Q++ LS PY  +  +  ++                                          E  +  LR+RGLCLVPISCT  V   NGAD W P+
Sbjct:  263 KVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPA 400          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 2
Query:  515 SAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV--KVLSAPYLQSMPAAKVQELEQYS--------------LRNRGLCLVPISCT 763
            S K RKEKLG+RI ALQQLVSP+GKTDTASVL +A++YI+FL EQ+  KV ++P+L S+ + + ++    S              LR+RGLCL+PIS T
Sbjct:  188 SFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISST 286          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH114_ARATH (Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 2
Query:  515 SAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAAKVQ------------ELEQ--------YSLRNRGLCLVPISCTAGVA 775
            S K RKEKLG+RI ALQQLVSP+GKTDTASVL EA+EYI+FL EQV VLS P   ++ + + Q            E+E+          L +RGLCL+PIS +  VA
Sbjct:  171 SFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQCSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPISASYPVA 277          
BLAST of EY660181 vs. ExPASy Swiss-Prot
Match: BH111_ARATH (Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 2
Query:  530 KEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAA-----------KVQELEQYSLRNRGLCLVPISCTAGVAXSNGA-DIWRPS 808
            K KL ++I  LQQ+VSP+GKTDTASVL EA+ YI F  EQVK+LS PY+++                 +  +   LR+RGLCLVPIS T      N A D W P+
Sbjct:  208 KAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNPT 312          
The following BLAST results are available for this feature:
BLAST of EY660181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
BH113_ARATH1.362e-2552.71Transcription factor bHLH113 OS=Arabidopsis thalia... [more]
BH123_ARATH2.403e-2249.58Transcription factor bHLH123 OS=Arabidopsis thalia... [more]
BH112_ARATH1.193e-2153.27Transcription factor bHLH112 OS=Arabidopsis thalia... [more]
BH133_ARATH4.242e-1942.75Transcription factor bHLH133 OS=Arabidopsis thalia... [more]
BH110_ARATH4.242e-1951.49Transcription factor bHLH110 OS=Arabidopsis thalia... [more]
BH068_ARATH2.105e-1841.30Transcription factor bHLH68 OS=Arabidopsis thalian... [more]
BH103_ARATH5.186e-1751.52Transcription factor bHLH103 OS=Arabidopsis thalia... [more]
BH114_ARATH1.155e-1651.40Transcription factor bHLH114 OS=Arabidopsis thalia... [more]
BH111_ARATH1.277e-1546.67Transcription factor bHLH111 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660181 ID=EY660181; Name=EY660181; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGCCCATTTATGGCTTCTCTTTTTTAACCCTTTTGATGCTC
AAATTTCAACTGGGTTTCGGTGATTTTAGTGAACTCTTTTGAAGTTTTGA
TTAAAGGGTTTAATTTTGTCGTAAAGTTTTCAACTTTTTGAGACGCAAAA
ACTGACAAATTTAAGCAGAAAGTTCCATTTTCTTGAAAGGGAAACCGTTT
TTTTGTTTCCAAAGACGGACTTTTGGGTTCGTTGTTTTTTAAAAAAAAAA
CTTGGAACAAAGCCATTTATTTTGGCTTTCACTAAACACTTCGGTGGAAA
TTTGAGTGATACTTGAACTGGGCTGTGATTGTTTTTAGCGTATAAAGCTC
AGATTTTTATTGTGAGCTCTCTTGGCAATGCTGACTCTATACTCTTGGGA
GTATAAGGTATAAAGGTGTCGAAGATGATGGAAAATAAAAGAAGTCCTTG
TGCTGTTGACCAAGGCAGTCTCCCTACTCTTACATCCAAGCGACACAAAG
CTGATCTGTCCATCTCCGCCAAGGAGAGGAAAGAGAAGCTTGGTGAACGA
ATCATTGCTCTGCAACAGCTTGTTTCACCATATGGAAAGACGGATACTGC
ATCTGTCCTTTGGGAGGCGATGGAGTACATACAATTTCTACATGAACAAG
TGAAGGTGTTGAGTGCTCCATACCTCCAAAGCATGCCAGCAGCTAAGGTG
CAGGAATTAGAGCAGTATAGCCTGAGAAACCGAGGTTTATGTCTCGTTCC
AATTTCCTGTACTGCTGGAGTTGCTCNGAGCAATGGTGCTGACATTTGGC
GACCATCCAGACCACTTCACCTAATTGAGAAAGCATCACACATTTCATTT
GACACAGCATTGCTCACTGCCGTAAAGCTTCAG
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