EY660146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.203e-25 Identity = 71/213 (33.33%), Postives = 114/213 (53.52%), Query Frame = 2 Query: 206 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS-KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTLQVWSLLKGKM 838 ME+ + + S A W+L SGA L Y+ + P GLA + +L ++QL I W K Q++ K + P+ + + +G Y+ G S +IY+WEV++G LL HY+ V+CL F+ D S ISG +D V WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T+++W + G++ Sbjct: 5 MEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL------GKNYICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAG-ISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAP--RHVWSRHTLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGEL 208
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 68/215 (31.63%), Postives = 113/215 (52.56%), Query Frame = 2 Query: 206 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS---KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTLQVWSLLKGKM 838 ME+++ + S A W+L SGA L Y+ + P GLA + +L ++Q G +W K Q++ K + P+ + +G Y+ G + IY+WEV++G LL HY+ V+CL F+ DGS +S +D V WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T+++W++ G + Sbjct: 5 MEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ--------QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGSHFVSAGKDCLVLAWSLCSVLQADPSRILAP--RHVWSQHTLPITDLHCGFGGPMARVATASLDQTMKLWAISSGDL 208
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 69/214 (32.24%), Postives = 115/214 (53.74%), Query Frame = 2 Query: 206 MELLIASSSVADAGIGC--WDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS-KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTLQVWSLLKGKM 838 ME+ + + S A C W+L SGA L Y+ + P GLA + +L ++QL I W K Q++ K + P+ + A+ +G Y+ G + I++WEV++G LL HY+ V+CL F+ D S ISG +D V +WSL +V + S+ + H ++ H L ITD+ G+GG A + ++S D+T+++W + G++ Sbjct: 5 MEVAVCTDSAAPMW-SCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL------GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAP--RHVWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGEL 208
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: WDR18_MOUSE (WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.085e-22 Identity = 66/215 (30.70%), Postives = 111/215 (51.63%), Query Frame = 2 Query: 206 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS---KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTLQVWSLLKGKM 838 ME+++ + + A W+L SGA L Y+ + P GLA + +L ++Q G +W K Q++ K + P+ + +G Y+ G + IY+WEV +G LL HY+ V+CL F+ DGS +S +D WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T+++W++ G + Sbjct: 5 MEVVVCTDAAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ--------QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVCTGNLLVILSRHYQDVSCLKFTGDGSHFVSAGKDCLALAWSLCSVLQADPSRILAP--RHVWSQHTLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDL 208
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_DEBHA (Pre-rRNA-processing protein IPI3 OS=Debaryomyces hansenii GN=IPI3 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17 Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 488 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIW---SLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTLQVWSLL 826 +AGG ++G IY+WE+ASG LL AHY+A+T + FSQ G+FL+SGS D +W L++V+ + E + SFT H+L ITD+ I G+ + + S D TL+++ ++ Sbjct: 121 LAGGSKTGKIYVWELASGNLLCVKEAHYQAITAIKFSQCGTFLVSGSSDARCMVWRTSDLISVYNKDEESSINIKPFASFTDHSLPITDLAISEAGIISDLRLYTVSRDSTLRIYDIM 238
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_SCHPO (Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe GN=crb3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17 Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 206 MELLIASSSVAD---AGIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEE---CESQRASHLYLHSFTGHTLRITDIVIGYGG-VSATIVSASEDRTLQVWSLLKGKM 838 MELL++ + + + C +L +G ++ +SP C L S+Q +P + ++ K ++ + E + + ++ G+++A G + G++Y+W + SG L+ + AHY+ +T L FS DG L + S DG V W + T+ ++ E+ +S + F+GH I + IG G VS + +ASED T+++W + G + Sbjct: 1 MELLLSGCEAIEGEPSNVLCHNLHTGTLVSTFRQ-SSPAKNATCTTLNHLLSAQ-HTRPQLN-----IHNFGKEILDQSIILPEILICVQSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDVFAWLISTLVDQNSTFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRIWDVSTGNL 211
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_YARLI (Pre-rRNA-processing protein IPI3 OS=Yarrowia lipolytica GN=IPI3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.982e-16 Identity = 62/212 (29.25%), Postives = 117/212 (55.19%), Query Frame = 2 Query: 209 ELLIASSSVADAGIGCWDLESGAEQLRYKSCASPPHGLACV-----GQRFLASSQLREQPSASSGSILY-WSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSAT-IVSASEDRTLQVWSL 823 EL+I +++ + DL SG +K+ + P+ + G L S+Q + G++++ ++W++ V+ + + E + +AA++ GT++AGG SG +++WE+ASG+L+ HY+AVT L F+ DG L S S+D V WSL+T+ + + + ++T H L + D+V+G G T + + S D+T+++W + Sbjct: 3 ELIIYTTNKGACAV---DLHSGNNITHFKNDETAPNLSVFLTNTPSGNPLLFSAQTK-------GAMMHVYNWNRESVDQQIVLPEKLSCLAASTCGTWLAGGSASGRLFVWELASGKLVFSREVHYQAVTKLAFT-DG-LLFSTSKDARVLGWSLVTMASDPKDCQP----CITWTEHNLGVVDLVVGGGPTRDTRVFTVSTDKTVRIWDV 198
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_USTMA (Pre-rRNA-processing protein IPI3 OS=Ustilago maydis GN=IPI3 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15 Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 368 QPSASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWS---LLTVFEECESQRASHLY----LHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTLQVWSL 823 Q ++ ++ +SW + + + + + IA + +G +AGG G I +W++A+G LL + AHYR+VT L ++ DG+ L++GSED + +WS LL ++ S S + + H L ITD+ I G A ++S+S D ++++W L Sbjct: 78 QLESNKAALNIFSWQRDHLLQRIILPSKLSCIACSPNGDLVAGGSFDGRILLWQIATGDLLASFDAHYRSVTVLKWTCDGAGLLTGSEDARILVWSLAGLLAPHDQTSSSITSSEHNPAPYCTLADHNLAITDLDISSGRFPHQAMVLSSSSDASVKLWDL 238
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_PICST (Pre-rRNA-processing protein IPI3 OS=Pichia stipitis GN=IPI3 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15 Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 488 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIW---SLLTVF--EECESQRASHLYLHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTLQVWSLL 826 +AGG +SG IY+WE++SG LL AHY+ VT + FS+ G+FL++GS+D +W L+ VF + ES R YL + T +TL +TD+V+ GV + + S D TL+++ ++ Sbjct: 122 LAGGSKSGKIYVWELSSGSLLCVKEAHYQNVTVVKFSKCGTFLVAGSDDARCTVWKTLDLIAVFDGDNDESSRNFKPYL-AITDNTLAVTDLVLNEPGVINDLKLYTVSRDNTLRIYDII 240
BLAST of EY660146 vs. ExPASy Swiss-Prot
Match: IPI3_PICGU (Pre-rRNA-processing protein IPI3 OS=Pichia guilliermondii GN=IPI3 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.132e-14 Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 374 SASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGT---------------YIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSL--LTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVS-ATIVSASEDRTLQVWSLLKGKM 838 + S I +SW K + + EP+ +A H + +AGG SG +Y+WE++SG L+ AHY+A+ L FS+ G++L+SG D +W L ++ E+Q+ + +F HTL +TDI + G S + S+S+D T++ + + GK+ Sbjct: 54 AGSKPLITVYSWGKESPDQRIPVPEPLTCMALCKHPSNEKINHKVPTFQLPWLLAGGSASGKLYIWELSSGNLVCVKEAHYQAINVLKFSECGTYLVSGGADARCSVWKTLDLVTIDDPETQKTASAL--TFMDHTLAVTDIWLTTGIRSDIRLYSSSKDGTVRNYDITSGKL 224 The following BLAST results are available for this feature:
BLAST of EY660146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660146 ID=EY660146; Name=EY660146; organism=Citrus sinensis; type=EST; length=887bpback to top |