EY660094

Overview
NameEY660094
Unique NameEY660094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7533 contig Csv1_Contig7533:1..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.631e-23
Identity = 60/172 (34.88%), Postives = 100/172 (58.14%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+                +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+     + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R L   +W+
Sbjct:    2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYA--TVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWI 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.626e-21
Identity = 58/169 (34.32%), Postives = 92/169 (54.44%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R    F   +  +            +  +Y++    +++Y  + D+F I ++V+P  +LALLI+      I   + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RFL   +WV
Sbjct:    2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWV 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.378e-20
Identity = 54/169 (31.95%), Postives = 92/169 (54.44%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            N+F + A+  H++ I +L+ K+ K ++C G+S +SQ L A+    R    F   Y ++               +Y++    +++Y  + D F I ++V+P  +LAL+I+      +   + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RFL   +WV
Sbjct:    2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYIFNWV 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.932e-20
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+    R   ++  F+  Y+               +++ +R +  +R SY +D+D F   ++V+PC +LAL+I+   +      + W F +YLEAV++LPQL ++Q T+ ++  T  Y+F LG  R     +WV
Sbjct:    2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLS--IVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFT---FKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWV 169          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.932e-20
Identity = 55/169 (32.54%), Postives = 91/169 (53.85%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            NLF ++A+ VH + I  L+ K++  K C G+SL+SQ L  I    R    F   Y ++             + IY+I    R++Y +  D   ++Y++VPC VLA +    T    +  I W F ++LEAV++LPQ+ ++++T  VE   + Y+F LG+ R L   +W+
Sbjct:    4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWI 169          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.167e-19
Identity = 59/189 (31.22%), Postives = 104/189 (55.03%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLPDLDSRGHLLVALGYGL 799
            N+F  A +  H   I +L+ K+ K ++CAG+S KSQ L A+    R   L+ ++V  Y+                +Y++    +++Y  + D+F I +++VPCA+L+L+I+   +   +  + W F +YLE+V++LPQL ++  T   E  T+HY+FALG  R L   +WV   +    + L+A+  G+
Sbjct:    2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN--SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT---VMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGV 185          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.394e-19
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+                ++MI    +++Y  + D F + ++VVP AVLA L+ H  T   IL    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R L   +W+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 58/163 (35.58%), Postives = 90/163 (55.21%), Query Frame = 2
Query:  263 EAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYD--IHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            +  H   I +L++++ K KTC+GLSLKS  L  +    R Y +    Y    +            ++ Y++   LR +Y +  D F   Y++  CAVLAL I+P TS+ I N I W F ++LE+V++LPQL ++Q +   E  TAHY+FA+ + R L   HW+
Sbjct:    9 DMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTR-YLNLFWRYKSLYYFLMRIVFIASESYICYLMLMTLRPTYDKRLDTFRTEYILGGCAVLAL-IYP-TSYTISN-ILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIPHWI 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD21_XENTR (ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 57/162 (35.19%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  272 HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +F+  Y+                I+MI    +++Y  + D F + +++VP A+LA L+ H  T   IL    W F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R L   +W+
Sbjct:   12 HLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYNTSMKMVYVASSYA--TIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRALYLFNWI 167          
BLAST of EY660094 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 2
Query:  245 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 745
            NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+                ++MI    +++Y  + D F + ++VVP A+LA L+ H  T   IL    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R L   +W+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI 167          
The following BLAST results are available for this feature:
BLAST of EY660094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ERD22_CAEEL8.631e-2334.88Putative ER lumen protein retaining receptor C28H8... [more]
ERD2_CAEEL3.626e-2134.32ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD2_CAEBR1.378e-2031.95ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD2_PETHY8.932e-2032.37ER lumen protein retaining receptor OS=Petunia hyb... [more]
ERD2_ENTHI8.932e-2032.54ER lumen protein retaining receptor OS=Entamoeba h... [more]
ERD2_DROME1.167e-1931.22ER lumen protein retaining receptor OS=Drosophila ... [more]
ERD21_RAT3.394e-1934.88ER lumen protein retaining receptor 1 OS=Rattus no... [more]
ERD2_SCHPO4.433e-1935.58ER lumen protein retaining receptor OS=Schizosacch... [more]
ERD21_XENTR4.433e-1935.19ER lumen protein retaining receptor 1 OS=Xenopus t... [more]
ERD21_MOUSE4.433e-1934.30ER lumen protein retaining receptor 1 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660094 ID=EY660094; Name=EY660094; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGCCCAATCGGATACTCAATTGTCTCGCTCTCTCTAAATTA
CATCTCACTTTCTCGCACTTTCTCGCACTTTCCGGGAAAATATTTTTAGA
CCGCTCATGAGGGCGCCGAAGAGGCCGATCCACGCGGTTTCGACATGGGT
CCGGCGACAGCCGCCGAAAGTGAAGGCATTTTTGGCGGTGGTCTCCGGCA
TGGCAGCGCTGGTTTTGCTCCGATTCATTGTACACGACCACGATAACCTC
TTCGTTGCTGCCGAGGCCGTGCACTCCATTGGAATCTCCGTGTTAATATA
CAAGCTCATGAAAGAGAAAACTTGTGCTGGACTGTCACTCAAATCCCAGG
AACTAACAGCTATTTTCTTAGCTGTGAGGCTATACTGTAGTTTTGTGATG
GAATACGATATACACACCCTACTGGATTTAGCTACTTTGGCTACGACCCT
TTGGGTTATTTATATGATCCGTTTCAATCTAAGGTCTAGTTACATGGAGG
ACAAGGACAACTTTGCAATATATTATGTGGTGGTACCCTGTGCAGTATTG
GCTCTGTTAATTCATCCATCGACTTCGCATAATATATTGAATAGAATTTT
CTGGGCATTCTGCGTTTATCTGGAAGCTGTTTCAGTACTGCCCCAGTTGC
GGGTGATGCAGAACACAAAGATTGTTGAACCATTCACAGCCCATTATGTA
TTTGCGCTTGGTGTTGCGAGGTTTTTGAGCTGTGCCCACTGGGTTCTCCC
AGATCTGGATAGCCGTGGACACTTGCTGGTAGCCCTGGGCTATGGATTGT
GGCCTTCGATGGTGCTTATCTCCGAGATTGTCCAAACTTCATCTTAGCGG
ACTTTCGTAATACTATGGCAAAAGGGCCTTGGCGGAAAGCTAATCCTCCG
ACTTCCT
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