EY705654

Overview
NameEY705654
Unique NameEY705654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYS_HELAN (Seryl-tRNA synthetase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.680e-68
Identity = 122/153 (79.74%), Postives = 131/153 (85.62%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 494
            GIFRVHQFEKVEQFC+T P+GNDSW+MHEEMIKNSEEFYQMLK+PYQVV+IVSG              WFPAS+TYRELVSCSNCTDYQSR+LEIR GQKK NEQ KQY HLLNSTLTATERT+CCILENYQ E GV +PEVLQPFMGGKTFL
Sbjct:  278 GIFRVHQFEKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCILENYQTEKGVAIPEVLQPFMGGKTFL 430          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYS_ARATH (Seryl-tRNA synthetase OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.054e-67
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 494
            GIFRVHQFEK+EQFCIT PN N SW+M +EM+KNSE+FYQ LK+PYQ+V+IVSG              WFP+S+T+RELVSCSNCTDYQ+RRLEIRYGQKKSNEQTKQYVH+LNSTLTATERTICCILENYQ+EDGV++PEVLQPFMGG+TFL
Sbjct:  281 GIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQPFMGGETFL 433          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_DICDI (Seryl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=serS PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.639e-49
Identity = 96/148 (64.86%), Postives = 106/148 (71.62%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMG 479
            GIFRVHQFEK+EQFCIT P    SWDM EEMI NSE+FYQ L IPY+VV IVSG              WFP    YRELVSCSNCTDYQSR LEIR G KK  +Q K+YVH+LNSTL AT R ICCILENYQ E G+ VP  L+P++G
Sbjct:  279 GIFRVHQFEKIEQFCITEPE--KSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPVPLRPYLG 424          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_SCHPO (Seryl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC29A4.15 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49
Identity = 93/153 (60.78%), Postives = 111/153 (72.55%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 494
            GIFRVH FEK+EQF +T P    SW+   EMI ++E+FY+ L++PY++VAIVSG              WFP    Y+ELVSCSNCTDYQSR LEIR G KK  ++ K+YVH LNSTL ATER +CCILENYQ  DGV VP+VLQP+MGGKTFL
Sbjct:  283 GIFRVHAFEKIEQFVLTDPE--KSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDGVNVPKVLQPYMGGKTFL 433          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_CANAL (Seryl-tRNA synthetase, cytoplasmic OS=Candida albicans GN=SES1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.809e-47
Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGK 485
            GIFRVH FEK+EQF +T P    SW+  + MI  SEEFYQ L +PY+VV IVSG              WFP  Q Y+ELVSCSNCTDYQSR LEIR G K+ N+Q K+YVH LNSTL+ATERTICCILENYQKEDG+ +PEVL+ ++ G+
Sbjct:  291 GIFRVHAFEKIEQFVLTEPE--KSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQKEDGLVIPEVLRKYIPGE 438          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_CRIGR (Seryl-tRNA synthetase, cytoplasmic (Fragment) OS=Cricetulus griseus GN=SARS PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.096e-45
Identity = 89/147 (60.54%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 476
            GIFRVHQFEK+EQF  TSP+ N SW+M EEMI  +EEFYQ L IPY +V IVSG              WFP S  +RELVSCSNCTDYQ+RRL IRYGQ K      ++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct:    8 GIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFM 154          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_PONAB (Seryl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=SARS PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.431e-45
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 476
            GIFRVHQFEK+EQF  +SP+ N SW+M EEMI  +EEFYQ L IPY +V IVSG              WFP S  +RELVSCSNCTDYQ+RRL IRYGQ K      ++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct:  314 GIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 460          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_MACFA (Seryl-tRNA synthetase, cytoplasmic OS=Macaca fascicularis GN=SARS PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.431e-45
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 476
            GIFRVHQFEK+EQF  +SP+ N SW+M EEMI  +EEFYQ L IPY +V IVSG              WFP S  +RELVSCSNCTDYQ+RRL IRYGQ K      ++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct:  314 GIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 460          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_HUMAN (Seryl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=SARS PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.431e-45
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 476
            GIFRVHQFEK+EQF  +SP+ N SW+M EEMI  +EEFYQ L IPY +V IVSG              WFP S  +RELVSCSNCTDYQ+RRL IRYGQ K      ++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct:  314 GIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 460          
BLAST of EY705654 vs. ExPASy Swiss-Prot
Match: SYSC_BOVIN (Seryl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=SARS PE=2 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 2.441e-45
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   36 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 476
            GIFRVHQFEK+EQF  +SP+ N SW+M EEMI  +EEFYQ L IPY +V IVSG              WFP S  +RELVSCSNCTDYQ+RRL IRYGQ K      ++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct:  314 GIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFM 460          
The following BLAST results are available for this feature:
BLAST of EY705654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYS_HELAN2.680e-6879.74Seryl-tRNA synthetase OS=Helianthus annuus PE=2 SV... [more]
SYS_ARATH5.054e-6776.47Seryl-tRNA synthetase OS=Arabidopsis thaliana GN=A... [more]
SYSC_DICDI3.639e-4964.86Seryl-tRNA synthetase, cytoplasmic OS=Dictyosteliu... [more]
SYSC_SCHPO8.106e-4960.78Seryl-tRNA synthetase, cytoplasmic OS=Schizosaccha... [more]
SYSC_CANAL5.809e-4761.33Seryl-tRNA synthetase, cytoplasmic OS=Candida albi... [more]
SYSC_CRIGR1.096e-4560.54Seryl-tRNA synthetase, cytoplasmic (Fragment) OS=C... [more]
SYSC_PONAB1.431e-4559.86Seryl-tRNA synthetase, cytoplasmic OS=Pongo abelii... [more]
SYSC_MACFA1.431e-4559.86Seryl-tRNA synthetase, cytoplasmic OS=Macaca fasci... [more]
SYSC_HUMAN1.431e-4559.86Seryl-tRNA synthetase, cytoplasmic OS=Homo sapiens... [more]
SYSC_BOVIN2.441e-4559.86Seryl-tRNA synthetase, cytoplasmic OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-046-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705654 ID=EY705654; Name=EY705654; organism=Citrus sinensis; type=EST; length=719bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGAATATTCCGCGTC
CATCAGTTTGAGAAAGTGGAGCAATTTTGCATCACCAGCCCGAATGGCAA
TGACTCATGGGACATGCATGAAGAAATGATAAAAAACTCTGAAGAATTTT
ATCAGATGCTAAAAATTCCCTATCAAGTCGTGGCTATTGTCTCTGGTGCT
TTAAATGATGCAGCTGCGAAGAAGTTAGATTTGGAAGCCTGGTTTCCTGC
ATCGCAAACCTACAGAGAGCTGGTGTCATGTTCAAACTGTACGGATTACC
AGTCAAGAAGATTAGAGATTCGATATGGGCAGAAAAAGAGCAATGAGCAG
ACAAAACAATATGTTCACTTGTTGAACTCAACCCTCACAGCAACCGAGAG
GACCATTTGCTGTATCCTTGAGAACTACCAGAAGGAAGATGGTGTCGAAG
TACCAGAAGTTCTACAACCTTTCATGGGTGGAAAGACTTTCCTGCCTTTC
AAGGCCAAGCCAGCTCCTGAAGCCAAAGGGAAGAAATCCAAGGCTTAGTT
TAGTTCATCTATTANATCCCCAGAAACCAGTTGCAGAACTAGTGGGATCT
AGCTTTTAGATTTGTGAAATNCAAGATTTAGTGGAAACAAATACGAAAAC
GATCCTCAAATTATTGTGTAATGCATTTTCAAGAAATTTGACAGCCTAAA
AAAAAAAAAAAAAAAAAAA
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