EY659968

Overview
NameEY659968
Unique NameEY659968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12042 contig Csv1_Contig12042:1211..2082. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.390e-53
Identity = 98/169 (57.99%), Postives = 135/169 (79.88%), Query Frame = 1
Query:   13 GKLCPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKCAVTDSAIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVLS 519
            GKLCPQL+++DL G + +T++GFL +++S    L K+N SGC NLTD+V+S +   +GWTLE+LN+DGC  I+DASL++IA NC +L DLD+SKCA++DS I +LA  + L LQILS++GCSMV+DKSL A+  LG TLLGLNLQ C +IS ++VD LVE+L++CD+LS
Sbjct:  463 GKLCPQLEDIDLCGLKGITESGFLHLIQS---SLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVERLYKCDILS 628          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: EBF2_ARATH (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.756e-47
Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 1
Query:   13 GKLCPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKCAVTDSAIASLAHG-NYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVL 516
            GK C QLQ+V+L G   VTDAG   +L+S   GL KVNLS C+N++D  VS ++  HG TLE LNLDGC+ I++ASL+A+A NC  + DLD+S   V+D  I +LA   N+LNLQ+LS+ GCS ++DKS   ++KLG+TLLGLN+Q C  IS+++VD L+E LWRCD+L
Sbjct:  454 GKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNIQRCGRISSSTVDTLLENLWRCDIL 622          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FBL5_ARATH (F-box/LRR-repeat protein 5 OS=Arabidopsis thaliana GN=FBL5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 54/170 (31.76%), Postives = 90/170 (52.94%), Query Frame = 1
Query:   22 CPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGC-RKISDASLMAIADNCPLLCDLDVSKCA-VTDSAIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVE-------QLWR 504
            C +LQ++DLS    +TD     +   C   L K+NLSGC + +D  ++ +       L++LNL GC   +SD +L AI +NC  L  L++  C  ++D  + SLA+G   +L+ L L  C +++D+S+ AL      L  L L +C  I+  ++  L +       ++WR
Sbjct:  116 CHELQDLDLSKSSKITDHSLYSLARGC-TNLTKLNLSGCTSFSDTALAHLTRFCR-KLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYG-CPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWR 282          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: YKK7_CAEEL (Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis elegans GN=C02F5.7 PE=4 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 48/159 (30.19%), Postives = 90/159 (56.60%), Query Frame = 1
Query:   13 GKLCPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKC-AVTDSAIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDML 486
            G  CP L  +++S   A+ D G   +L +C++ L  + L GC  LT+ V  ++ E H   ++ LNL  C +++D ++  IA+    L  L +S C  ++D ++ SL   ++ NL++L LSGC+++ D     L +  + L  L+++ C+ IS ++++ L
Sbjct:  197 GDGCPNLSYLNISWCDAIQDRGVQIILSNCKS-LDTLILRGCEGLTENVFGSV-EAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSH-NLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSL 352          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FBXL2_MOUSE (F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 1
Query:   34 QNVDLSGFQAVTDAGFLP-VLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKC-AVTDSAIASLAHG----NYLN---------------------LQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVL 516
            Q VDL  FQ   +   +  + + C   L K++L GC+ + D  + T A+ +   +E LNL+GC KI+D++  +++  C  L  LD++ C +VT+S++  ++ G     YLN                     L+ L L GC+ + D++L  ++     L+ LNLQ C+ I+ + V  +     R   L
Sbjct:   53 QRVDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQ-NCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQAL 239          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FBXL2_PONAB (F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 51/188 (27.13%), Postives = 91/188 (48.40%), Query Frame = 1
Query:   34 QNVDLSGFQAVTDAGFLP-VLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKC-AVTDSAIASLAHG----NYLN---------------------LQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVL 516
            Q +DL  FQ   +   +  + + C   L K++L GC+ + D  + T A+ +   +E LNL+GC KI+D++  +++  C  L  LD++ C ++T+S++  ++ G     YLN                     L+ L L GC+ + D++L  ++     L+ LNLQ C+ I+   V  +     R   L
Sbjct:   53 QRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQ-NCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQAL 239          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FBXL2_HUMAN (F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 51/188 (27.13%), Postives = 91/188 (48.40%), Query Frame = 1
Query:   34 QNVDLSGFQAVTDAGFLP-VLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKC-AVTDSAIASLAHG----NYLN---------------------LQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVL 516
            Q +DL  FQ   +   +  + + C   L K++L GC+ + D  + T A+ +   +E LNL+GC KI+D++  +++  C  L  LD++ C ++T+S++  ++ G     YLN                     L+ L L GC+ + D++L  ++     L+ LNLQ C+ I+   V  +     R   L
Sbjct:   53 QRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQ-NCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQAL 239          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FBXL2_BOVIN (F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 49/178 (27.53%), Postives = 90/178 (50.56%), Query Frame = 1
Query:   34 QNVDLSGFQAVTDAGFLP-VLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKC-AVTDSAIASLAHG----NYLN---------------------LQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDML 486
            Q +DL  FQ   +   +  + + C   L K++L GC+ + D  + T A+ +   +E LNL+GC KI+D++  +++  C  L  LD++ C ++T+S++  ++ G     YLN                     L+ L L GC+ + D++L  ++     L+ LNLQ C+ ++ + V  L
Sbjct:   53 QRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQ-NCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQL 229          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FXL20_MOUSE (F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 46/162 (28.40%), Postives = 83/162 (51.23%), Query Frame = 1
Query:   13 GKLCPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKCA-VTDSAIASLAHGNYLNLQILSLSGCSMVSD---KSLGALRKLGQTLLGLNLQHCNAISTNSVDML 486
            G  CP+L  ++L     +TD G + +   C   L  +  SGC N+TD +++ + + +   L +L +  C +++D     +A NC  L  +D+ +C  +TDS +  L+  +   LQ+LSLS C +++D   + LG        L  + L +C  I+  S++ L
Sbjct:  217 GAHCPELVTLNLQTCLQITDEGLITICRGCHK-LQSLCASGCSNITDAILNALGQ-NCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSI-HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHL 375          
BLAST of EY659968 vs. ExPASy Swiss-Prot
Match: FXL20_HUMAN (F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 46/162 (28.40%), Postives = 83/162 (51.23%), Query Frame = 1
Query:   13 GKLCPQLQNVDLSGFQAVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAIADNCPLLCDLDVSKCA-VTDSAIASLAHGNYLNLQILSLSGCSMVSD---KSLGALRKLGQTLLGLNLQHCNAISTNSVDML 486
            G  CP+L  ++L     +TD G + +   C   L  +  SGC N+TD +++ + + +   L +L +  C +++D     +A NC  L  +D+ +C  +TDS +  L+  +   LQ+LSLS C +++D   + LG        L  + L +C  I+  S++ L
Sbjct:  217 GAHCPELVTLNLQTCLQITDEGLITICRGCHK-LQSLCASGCSNITDAILNALGQ-NCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSI-HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHL 375          
The following BLAST results are available for this feature:
BLAST of EY659968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
EBF1_ARATH4.390e-5357.99EIN3-binding F-box protein 1 OS=Arabidopsis thalia... [more]
EBF2_ARATH2.756e-4754.44EIN3-binding F-box protein 2 OS=Arabidopsis thalia... [more]
FBL5_ARATH1.803e-1431.76F-box/LRR-repeat protein 5 OS=Arabidopsis thaliana... [more]
YKK7_CAEEL5.800e-1330.19Uncharacterized F-box/LRR-repeat protein C02F5.7 O... [more]
FBXL2_MOUSE2.204e-1228.19F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl... [more]
FBXL2_PONAB2.878e-1227.13F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL... [more]
FBXL2_HUMAN2.878e-1227.13F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL... [more]
FBXL2_BOVIN2.878e-1227.53F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 ... [more]
FXL20_MOUSE9.260e-1128.40F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbx... [more]
FXL20_HUMAN9.260e-1128.40F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659968 ID=EY659968; Name=EY659968; organism=Citrus sinensis; type=EST; length=872bp
TTGCTTAAAAGGGGGAAATTGTGCCCTCAGTTGCAGAATGTTGATTTGAG
TGGGTTTCAGGCTGTAACAGATGCTGGGTTTTTACCAGTGCTTGAGAGTT
GTGAGGCTGGTCTTGCAAAGGTTAATCTTAGTGGTTGTGTGAATTTGACT
GACAAAGTTGTTTCAACGATGGCTGAATTGCATGGTTGGACTCTAGAAAT
GTTGAATCTCGATGGTTGTAGGAAGATCAGTGATGCAAGCTTGATGGCAA
TTGCAGACAACTGCCCTTTGCTGTGTGATCTCGATGTCTCTAAGTGTGCT
GTCACTGATTCTGCTATTGCATCCCTAGCTCATGGAAACTATCTCAATCT
GCAGATTCTTTCGCTGTCAGGTTGCTCAATGGTTTCAGACAAGAGTTTGG
GTGCCCTAAGAAAGTTGGGTCAGACCCTTCTGGGTTTGAACCTCCAGCAC
TGCAATGCAATCAGCACCAACTCTGTTGACATGCTTGTGGAGCAGTTATG
GAGGTGTGATGTCCTCTCATAAGCTGCAAAGCATTCGACAAAACCCCATT
CGATAATATGTAGCACTGATACAAAGGATGGGGATGAACATATCANGAAG
TCTCAGAATTTTCTAGTCAGCATCTGTGAGTAGCAGCAGCAGTTTGTTTA
GTTTTTGGGTCCATCTGCTATGGGTCTTCAGTCTTCAAGTGCTCGGTTTC
TTTTTTCAGGGTGAATATGGCCTCTACCTTTTTTGCANGTTTCCGAATGA
AAGAAATCTGTTACAGCTTTTTGATGCCCATTACGGGTGTCACTTTAAGG
CATATTTTCCTGAGATACAGCTACTGGGGTATGGTTCTAGGGTATCCCTC
CGCTGTATATGGTTTGTGCTAC
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