EY659947

Overview
NameEY659947
Unique NameEY659947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659947 vs. ExPASy Swiss-Prot
Match: Y4105_ARATH (Uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.550e-81
Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = 3 
Query:   93 FGTENPLAIAGGVTILAVPLVLSQVLNK-PKSWGVESARNAYAKLGDDASAQLLDIRAPVEFRQVGSPDVRGLGKRPVSIVYKGDDKPGFLKKLSLKFKEPENTTLFILD 419
            F T+NPL IAGGV  LAVP VLSQVLNK PKSWGVESA+NAY KLG D +AQLLDIRA  +FRQVGSP+++GLGK+ VS VY G+DKPGFLKKLSLKFK+PENTTL+ILD
Sbjct:   98 FVTDNPLVIAGGVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILD 207

HSP 2 Score: 152.525 bits (384), Expect = 4.550e-81
Identity = 80/127 (62.99%), Postives = 90/127 (70.87%), Query Frame = 1 
Query:  424 RFDGNSELVAELVTINGFKNAYTIKDGAEGPRGWMNSGLPWIPPKKALGLDLSNLTETISGAIGEGSEGFSVTXXXXXXXXXXXXXFSEIETILQILGSAAPGQFASKKLLFGEGP*TTLHTVVESL 804
            +FDGNSELVAELV +NGFK+AY IKDGAEGPRGW+NS LPWI PKK L LDLS+LT++ISG  GE S+G SV              F+EIETILQ+LGSAA  Q A KKLLF E    TL  V E L
Sbjct:  208 KFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGESSDGVSVALGVAAAAGLSVFAFTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFL 334
The following BLAST results are available for this feature:
BLAST of EY659947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4105_ARATH4.550e-8177.27Uncharacterized protein At4g01050 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659947 ID=EY659947; Name=EY659947; organism=Citrus sinensis; type=EST; length=921bp
CCTCATCCCGAGGCGTCCGTGTTGATGTTTGCGGAAAATACTGTTCCAAA
ACTGATTACGCTGTCAATAAATCCACTTGCATCAACTTCACTTTTGGAAC
AGAGAATCCTTTAGCTATAGCTGGTGGTGTCACCATTTTGGCTGTTCCAT
TAGTTTTGTCTCAGGTTCTGAACAAGCCTAAGTCATGGGGTGTTGAGTCT
GCAAGGAATGCTTATGCAAAGTTGGGTGACGATGCGAGTGCCCAGTTGCT
TGATATAAGAGCTCCCGTGGAATTTCGGCAAGTAGGTAGTCCTGATGTCC
GGGGTTTGGGGAAGAGGCCGGTTTCGATTGTTTACAAAGGTGACGATAAG
CCGGGCTTCTTGAAGAAGCTGTCTTTGAAGTTCAAGGAACCAGAAAATAC
TACATTGTTCATTCTAGACAACCAGATTTGATGGGAACTCTGAACTGGTT
GCTGAGTTGGTCACCATAAATGGATTCAAAAATGCATACACTATAAAAGA
TGGAGCAGAAGGACCTCGTGGATGGATGAACAGTGGTCTTCCTTGGATAC
CGCCAAAGAAAGCATTGGGTCTTGACCTGAGCAATTTGACAGAAACTATC
AGTGGTGCAATTGGAGAGGGCTCGGAGGGCTTTTCTGTTACCCTTGCAAT
TGCTGCAGCTGCAGGATTGGGTGTTTTGGCATTTTCCGAGATAGAAACGA
TATTGCAAATTCTAGGCTCAGCTGCTCCTGGTCAATTTGCTAGCAAGAAG
CTCCTGTTTGGCGAGGGTCCGTAAACAACCCTCCACACGGTGGTGGAATC
CCTGACCCCAGGTCCGCCCCTAAGAGCTTGCTGTTGGCACTAAGAATTGG
AAAGACCTTTTTCCTCCCCGGGGAAGGACAAGCTCTCCCTGCTCCCCTGA
CGCAAAGCCAAAAGCAAAGAT
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