EY659929

Overview
NameEY659929
Unique NameEY659929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.624e-38
Identity = 74/140 (52.86%), Postives = 100/140 (71.43%), Query Frame = 1
Query:  319 LFSLCSLISRAFSHETVNAHNNHILPRPLILKYPDNLIETQLNQLNEEVKLQCTTWRFAVEANNLNPWKTIPRECLEYVRDYMMGRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYYQSMXMXLEI 738
            +F    L++ A   E +N+H   + PRPLI++YP+        QL +E+K  CTTWRF VE NNL+PWKTIP EC +YV++YM+G GY ++++RVS+EAG +AKSV+L  DG+D WIFD+DETLLSNLPYY      LE+
Sbjct:    3 IFVFLVLLTVAIGTENLNSH---VFPRPLIIEYPEK-------QLRDELK--CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEV 130          

HSP 2 Score: 25.0238 bits (53), Expect = 1.624e-38
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  773 GHVTGIEASVKLYEEVLGIGLLEFFADRRXE 865
            G    + +S+KLY+EVL +G   F    R E
Sbjct:  143 GTAPALGSSLKLYQEVLKLGFKVFLLTGRSE 173          
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.710e-18
Identity = 35/90 (38.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  466 KLQCTTWRFAVEANNLNPWKTIPRECLEYVRDYMMGRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYYQSMXMXLE 735
            +++C +WR AVEA+N+  ++TIP EC+E  ++Y+ G  Y  D + V+ +A  +A+ +E+    KD ++F ID T+LSN+PYY+     +E
Sbjct:   36 EVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVH--PKDTFVFSIDGTVLSNIPYYKKHGYGVE 123          

HSP 2 Score: 34.2686 bits (77), Expect = 8.710e-18
Identity = 16/48 (33.33%), Postives = 24/48 (50.00%), Query Frame = 3
Query:  714 EHGYGIGDFNPVEFDKWVXEAMSPE*RPV*NSMKKFWGLGF*NFLLTG 857
            +HGYG+  FN   +D+WV +  +P       +  K   LGF    L+G
Sbjct:  117 KHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSG 164          
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.744e-18
Identity = 35/90 (38.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  466 KLQCTTWRFAVEANNLNPWKTIPRECLEYVRDYMMGRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYYQSMXMXLE 735
            +++C +WR AVEA+N+  ++TIP EC+E  ++Y+ G  Y  D + V+ +A  +A+ +E+    KD ++F ID T+LSN+PYY+     +E
Sbjct:   39 EVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVH--PKDTFVFSIDGTVLSNIPYYKKHGYGVE 126          

HSP 2 Score: 34.2686 bits (77), Expect = 8.744e-18
Identity = 16/48 (33.33%), Postives = 24/48 (50.00%), Query Frame = 3
Query:  714 EHGYGIGDFNPVEFDKWVXEAMSPE*RPV*NSMKKFWGLGF*NFLLTG 857
            +HGYG+  FN   +D+WV +  +P       +  K   LGF    L+G
Sbjct:  120 KHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSG 167          
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.223e-17
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  430 IETQLNQLNEEVKLQCTTWRFAVEANNLNPWKTIPRECLEYVRDYMMGRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYYQSMXMXLE 735
            ++T   + + EVK  C ++R AVEA+N+  +KTIP EC+E  +DY+ G  +  D + V+ +A  +A   E+  +  D +IF ID T+LSN+PYY+     +E
Sbjct:   30 MKTGYGERSSEVK--CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREVHHN--DIFIFGIDNTVLSNIPYYEKHGYGVE 127          

HSP 2 Score: 35.039 bits (79), Expect = 4.223e-17
Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 3
Query:  714 EHGYGIGDFNPVEFDKWVXEAMSPE*RPV*NSMKKFWGLGF*NFLLTG 857
            +HGYG+ +FN   +D+WV +  +P       +  K   LGF    L+G
Sbjct:  121 KHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSG 168          
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 1
Query:  475 CTTWRFAVEANNLNPWKTIPRECLEYVRDYMM-GRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYY 711
            C +W   VE +N+  + T+P  C +YV DY++  + Y  D + V  EA  +AK + L+ D  + WIFD+D+TLLS++PYY
Sbjct:   52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYY 131          
BLAST of EY659929 vs. ExPASy Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.574e-13
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  313 VLLFSLCSLISRAFSHETVNAHNN---HILPRPLILKYPDNLIETQLNQLNEEVKLQCTTWRFAVEANNLNPWKTIPRECLEYVRDYMM-GRGYGLDLERVSNEAGVFAKSVELRGDGKDAWIFDIDETLLSNLPYY 711
            +L  SL  L++   SH   +A       +L    I      L+E +   +N      C +W   VE +N+  + T+P  C  YV DY++  + Y  D + V+ EA  +AK + L+ D  + WIFD+D+TLLS++PYY
Sbjct:    3 ILSLSLLLLLAATVSHVQSSASVPGLIELLESNTIFGNEAELLEKEGLSINYP---NCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYY 136          
The following BLAST results are available for this feature:
BLAST of EY659929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA1_SOLLC1.624e-3852.86Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1... [more]
S25K_SOYBN8.710e-1838.89Stem 31 kDa glycoprotein (Fragment) OS=Glycine max... [more]
VSPA_SOYBN8.744e-1838.89Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE... [more]
VSPB_SOYBN4.223e-1738.24Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE... [more]
VSP2_ARATH1.970e-1341.25Vegetative storage protein 2 OS=Arabidopsis thalia... [more]
VSP1_ARATH2.574e-1332.85Vegetative storage protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659929 ID=EY659929; Name=EY659929; organism=Citrus sinensis; type=EST; length=866bp
AAAGGACGCGTNCGNNNTAATCTTACTAAAATATGGCAGTTACCCTCTCA
ATTAATTCAAAATCCGTTAGTTACCTTATCTCCCACGCTAACACAATTCG
CAAGGAAAAAACAAAAAATCAAACCTTGTTACTGTTTCAAAGTTTCTTCT
TTTCTTTTCCCTTCATTTTCGTTTTCCCAAATGCAGAAGGGAACAAGATA
AAACCAAACACATCCCTTTTGGCTTCTAATCGATACCCATTTGTAAAAGC
CCACAATGCCTTTTCTTCTTGACAGCTTTAGATCAATTTCAACGATGGGT
TTGTTTAGGATTGTCTTGTTATTCTCGTTATGCTCGTTAATTTCTCGTGC
CTTTTCTCACGAGACAGTCAATGCTCACAACAATCACATTCTGCCCAGGC
CTTTGATTCTCAAGTACCCAGATAATTTAATCGAGACCCAGTTGAATCAA
CTCAATGAAGAGGTGAAACTACAGTGTACGACCTGGAGGTTTGCGGTTGA
AGCTAATAATTTGAATCCCTGGAAGACGATTCCGCGTGAGTGTTTGGAGT
ATGTGAGGGATTATATGATGGGTCGAGGTTATGGACTTGATCTCGAGAGG
GTTTCGAATGAAGCGGGTGTTTTTGCGAAGAGTGTTGAATTGCGTGGTGA
TGGGAAAGATGCGTGGATTTTTGATATTGATGAGACTTTGTTGTCAAATC
TTCCTTATTATCAGAGCATGGNTATGGNATTGGAGATTTCAATCCAGTGG
AGTTTGATAAGTGGGTTGANGAGGCCATGTCACCGGAATAGAGGCCAGTG
TGAAACTCTATGAAGAAGTTCTGGGGATTGGGCTTTTAGAATTTTTTGCT
GACCGGCGCANTGAGA
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