EY743805

Overview
NameEY743805
Unique NameEY743805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1044
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.046e-46
Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 314
            R VPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQNWQSN+YLNGQ+LSFKVTTSDGRTV S+N APA WS+G+T++G QFR
Sbjct:  147 RRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.193e-46
Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 314
            R VPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSFKVTTSDG+T+ S NVA A WSFG+T++GAQ R
Sbjct:  148 RRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQLR 250          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 8.858e-46
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 314
            R VPC RRGGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRT WQ MSRNWGQNWQSN  LNGQ+LSFKVT SDGRTV S N+APASWSFG+T++G QFR
Sbjct:  151 RRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.722e-44
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 314
            R V C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT WQ MSRNWGQNWQSN+YLNGQSLSF VTTSD R+V S+NVAP +WSFG+TY+G QFR
Sbjct:  152 RRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 5.374e-43
Identity = 79/102 (77.45%), Postives = 88/102 (86.27%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 311
            R VPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS TGWQPMSRNWGQNWQSN+YL+GQSLSF+V  SDGRTVTS NV PA W FG+T+ G QF
Sbjct:  150 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.018e-43
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 311
            R VPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA   W FG+T+ G QF
Sbjct:  145 RRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 7.018e-43
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 311
            R VPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA   W FG+T+ G QF
Sbjct:  145 RRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.042e-42
Identity = 80/103 (77.67%), Postives = 92/103 (89.32%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 311
            R VPC ++GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T  WQ MSRNWGQNWQSN+Y+N QSLSF+VTTSDGRT+ S +VAP++W FG+TY G QF
Sbjct:  151 RRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.579e-41
Identity = 79/103 (76.70%), Postives = 87/103 (84.47%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 314
            R V C R+GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN  L+GQ+LSFKVTTSDGRTV S N  P +WSFG+TY+G QFR
Sbjct:  150 RRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252          
BLAST of EY743805 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 9.486e-40
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 3
Query:    6 RPVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 311
            R V C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+GWQ MS NWG NWQ+   L+GQ LSF+VT SDGRTVTS NVAP+ WSFG+T+SG QF
Sbjct:  147 RRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248          
The following BLAST results are available for this feature:
BLAST of EY743805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP10_ARATH1.046e-4682.52Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA1_ARATH5.193e-4682.52Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP15_ARATH8.858e-4681.55Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA5_ARATH3.722e-4480.58Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA2_ORYSJ5.374e-4377.45Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSJ7.018e-4376.47Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI7.018e-4376.47Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH2.042e-4277.67Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP14_ARATH8.579e-4176.70Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXP11_ORYSJ9.486e-4073.53Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-108-C02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY743805 ID=EY743805; Name=EY743805; organism=Citrus sinensis; type=EST; length=1044bp
CCACGCGTCCGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAATC
AATGGCCATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGTGC
TGGTGATGTTCATGCTGTTTCAATCAAAGGGTCTAGAACTGGCTGGCAGC
CCATGTCAAGAAACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAAT
GGCCAAAGCCTGTCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGAC
TTCCTACAATGTTGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCG
GTGCTCAATTCCGCTAGAGCCACCAAGACCATTAGAGATTGGGTTTTAAC
ACCTTTTTTAGCTAAATATTCGTGTACTAAGTAGAATATTTTAGTATGAA
ATTTTAGCATACCTAGGGGTATATATATATATATATAAATATAAAATAGC
TATGTGGCTAGTTTTTTTGGCTTCCAGGGTCAAAAAATGAAAAAAAGGGG
CTTAATTTTAAAATGGCTTATTTTTTTTCATTTTGAATTGATTTTTAAGG
TTTGCGGGAGGTGTCTAATTATGGGGAACCCCTTTAATAACTTAGGGGAA
CCTTTTTTTTTACTTTTACTTTTTGGGGGTTTCTTTTTAGAATAAAACAC
AAATGGAAGAAGGGGAAAAATTATTTCCCCCCCCCATTATTATGTTTGAA
AAATACAAGCCTCTCCCTTTTTTAGTATTACTTCCTGGTAATATGAATTG
ACCCCAAAAACAATTTTTTAAGAAAGAACAATTTATAATATTAAACACCC
AAACATATATTCGAGAGAATAATAAAAGATCAATGATATAGAAAAAAAAG
ATAAATATTACTACATAAAATGTGTAGTTGTGGGTATAAAAAAAAAAAAG
ACAAAAAAAAAAGAAAACAAAAAGTAAAGAAAAAAAAAAAAAGATAGCGG
AGGGGGACAGATGAAATCAACTGTGTCGGAAATGAAGGTGAAATTTTAAA
AGTGAGTAAGAATTGAGTNCAGAGTGAGGGAAAAGAAGTGATTC
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