EY659761

Overview
NameEY659761
Unique NameEY659761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10867 contig Csv1_Contig10867:1020..1905. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659761 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 3
Query:   18 NSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEA-GDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVAL-FDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSAMSIIGNVQQQGTRVSFDLANNRVGFTPNKC 548
            NS   G   T  LI++ ++ TFYY+ L G SVG   + I PS F ++   G GGII+D GT +T     AY S+R  F+    NL   +G +  FD C+   S   ++++PT  +HF  G  L+LP++NY I   S G  C A   +S  MSI GN+QQQ   V +D  N+ V F   +C
Sbjct:  259 NSVTAGSPNTT-LIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQI-NLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGD-LELPSENYFIS-PSNGLICLAMGSSSQGMSIFGNIQQQNMLVVYDTGNSVVSFASAQC 434          
BLAST of EY659761 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 3
Query:   54 LIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSF---VRLAGNLKPTSGVALFDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSS-AMSIIGNVQQQGTRVSFDLANNRVGFTPNKC 548
            LI +    T+YY+ L G +VGG  + IP S F++ + G GG+I+D GT +T L   AYN++  +F   + L    + +SG++   TC+   S   +V+VP +S+ F  G  L+L  +N LI   + G  C A   +S   +SI GN+QQQ T+V +DL N  V F P +C
Sbjct:  271 LIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLS---TCFQQPSDGSTVQVPEISMQFDGG-VLNLGEQNILIS-PAEGVICLAMGSSSQLGISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435          
The following BLAST results are available for this feature:
BLAST of EY659761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR3.372e-2438.89Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR3.490e-2137.65Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659761 ID=EY659761; Name=EY659761; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGGAGTTCAACTCCGCACGAGGCGGTGACGCGGTCACGGCT
CCGTTGATTAGGAACAAAAAAGTTGACACGTTCTATTACGTGGGGCTCAC
TGGATTCAGCGTCGGTGGTCAGGCGGTCCAAATCCCACCATCGCTTTTTG
AAATGGACGAAGCAGGCGACGGCGGGATTATTGTTGATTGTGGAACCGCC
ATAACTCGCCTGCAGACTCAGGCCTACAACTCGCTCCGCGACTCTTTCGT
CAGGCTGGCGGGTAACTTGAAACCCACCAGCGGGGTCGCTTTATTCGACA
CGTGCTACGATTTCTCCGGATTAAGGAGTGTTAGGGTCCCAACGGTGTCG
CTTCACTTCGGTGCTGGAAAAGCTCTTGATTTACCCGCCAAAAATTACTT
GATTCCAGTAGACTCGGCTGGGACTTTCTGTTTCGCATTCGCTCCAACGT
CGTCGGCTATGTCAATTATTGGCAACGTGCAGCAACAGGGAACACGTGTC
AGTTTTGATTTGGCGAACAATCGCGTCGGGTTCACTCCCAATAAGTGTTA
GGCATTTTTCGGAACCCATAATTACCTTGTTACCCCTGGTAATTGGTAGA
AAAAGGGGACTGTTAGCTGTCTATTTGTTAGGAGAAACTTTTATACCCCT
TTTAATTGTTAGGAGAATGAACTGAAAGATGTTGCGTTAAAGTAGCGTTG
TTGACTGGTGGTGGATGAAAGTGGGATCCACCTCAATAAATTGCATTAAG
CTTTTGGCTGGAGTGGGTCGTGTCATTAAATCAATCATNAATTAGATCCG
TGTCCTCGCACGGNTGAGTGGCATGTATAGTAAATATATCTAAGCTGAAG
GGCAGTGTAGTCTGTAGTGTTGCGTTATTTGCACTAT
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