EY659641

Overview
NameEY659641
Unique NameEY659641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659641_ssr332 microsatellite EY659641_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 6.464e-59
Identity = 115/204 (56.37%), Postives = 143/204 (70.10%), Query Frame = 2
Query:  269 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFL NR+G PY+VQTNI+A+GKGDREQRVNLWFDP       T+   +    +++      +      +   +P + P   ++      DWAT GG +KID SK PF  + K     G  V
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPV 234          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 6.050e-57
Identity = 118/206 (57.28%), Postives = 143/206 (69.42%), Query Frame = 2
Query:  269 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEG--APFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFL NR+G PYTVQTN++A+GKGDREQRVNLWFDP        + S NH    F       + + K  E    P+PR  P   ++      DWAT GG +KI+ S+ PF  + K     G  V
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAI-SWNHLRIVFYVDNVPIR-VYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPV 233          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.655e-38
Identity = 88/191 (46.07%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTK 850
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY+ S+T    DE+DFEFL NRTG PY +QTN++  GKGDREQR+ LWFDP  +    ++    +Q  +++              G  FP   P   +N      DWAT GG +K D SK PF+   K
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYL-SSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYK 220          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.215e-38
Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFL NRTG PY +QTN++  GKGDREQR+ LWFDP       ++     Q   F+              G  FP   P   ++      DWAT GG +K D S  PF
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPF 216          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.390e-37
Identity = 87/191 (45.55%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTK 850
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFL NRTG PY +QTN++  GKGDREQR+ LWFDP       ++    +Q  +F+              G  FP   P   +N      DWAT GG +K D SK PF+   K
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYK 222          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.452e-36
Identity = 87/202 (43.07%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAH-----QGLP----KTGE--GAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVF 844
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFL N TG PY + TN++A GKGDREQ+  LWFDP          + N   Y  +W    H       LP       E  G PFP++ P   ++      DWAT GG  K D SK PF  +
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGA-THDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDP----------TKNFHTYSIVWR-PQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAY 215          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.508e-36
Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFL--WG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKVLD 883
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFL NRTG PY +QTN+Y NG G+RE R +LWFDP       ++   NHQ  +F+       ++   K      FP   P + F+      DWAT GG +K D  K PF+   K     G +  D
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKD 230          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.888e-36
Identity = 81/187 (43.32%), Postives = 110/187 (58.82%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFL NRTG PY +QTN+++ GKGDREQR+ LWFDP       ++    +   +F+              G  +P   P   ++      DWAT GG +K D SK PF+
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFV 217          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.689e-36
Identity = 79/186 (42.47%), Postives = 105/186 (56.45%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S      DE+DFEFL NRTGHPYT+ TN++  GKGDRE +  LWFDP       T+        + + G            G  +P+  P   ++      DWAT GG  KID S  PF
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSK-GTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPF 214          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.237e-35
Identity = 83/187 (44.39%), Postives = 107/187 (57.22%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F  ++  TW+  H++   GG  IQL LD+ +G GF +K  YLFG  SM IK+VPGDSAGTVTAF ++S      DE+DFEFL NRTG PY +QTN++  GKGDREQR+ LWFDP       ++    +Q  + +              G  FP   P   +N      DWAT GG +K D SK PF+
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFV 217          
The following BLAST results are available for this feature:
BLAST of EY659641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH6.464e-5956.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH6.050e-5757.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.655e-3846.07Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_TOBAC8.215e-3844.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN2.390e-3745.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH3.452e-3643.07Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH4.508e-3641.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT5.888e-3643.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH7.689e-3642.47Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTHB_PHAAN2.237e-3544.39Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659641 ID=EY659641; Name=EY659641; organism=Citrus sinensis; type=EST; length=986bp
TGGTNCGACCAGCCAGTTTCGGTGCCGGNATTCCCGGCCCCGACCCACGC
GTCCGTCTCCCGCGTCTATATAAATACACACTTCCCACAACGCTTCTAAA
CCATACTCAGCATACATAACCACAACATATAATTAAAGATCTCTTTCTAA
TTAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTA
TCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCC
TGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGT
CACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCC
AGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAG
TACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTC
TGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGA
GAGACGAGCTTGATTTTGAGTTCCTGAGAAACCGAACGGGGCATCCTTAC
ACGGTCCAAACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAG
AGTGAACCTCTGGTTTGACCCCTGCTGCAGATTATCACCTTGAACACTAT
TCTCTGGAAACCATCAACCATATTGGTTTCTATGGGGATGATGTGCCCAT
CAGGGGTTACCAAAAACAGGGGAAGGGGCTCCTTTTCCAAGAACCCACCC
CTGGTGGGGTTTCAACCCTGGGGGAACCCAAGACTGGGCAACAGGAGGGG
GGCCTAAAAAAATAGATGGGAGCAAAGGCCCTTTTATGGTTTTTACAAAG
ACTCTGATTTGGAGGGGGGCCAAGGTCCTGGACCACAAACTGGGCCTCGA
ACCGTGAACGGTGGGGGGGAAATAATTTAAACCTCCCCCGCTGGGAACAA
AAAAACAAGTGGTGGCCTTAAACCTGATCTTGTTTT
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