EY659169

Overview
NameEY659169
Unique NameEY659169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659169_ssr174 microsatellite EY659169_ssr174:174..200. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2064 contig Csv1_Contig2064:125..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659169 vs. ExPASy Swiss-Prot
Match: EXOC7_RAT (Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16
Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  245 EKAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHAIRKAHENIDKTLKAAEVILAQFDLSRQAESKILRGPHEDLESYLEAIDQLRSNISYFSSNKGFKNSEGVINNANTLLVKAISKLEDEFKQLLASYSKPLEP 688
            E  + +R+SL+KS  +T N+V+IL SF+ RL  LE ++ P   +T  +++  EN++KTL   + +++ + ++   E  I  GP   LE YL ++ +++  + YF  N         +N    L  +    LE EF+ L+  +SK + P
Sbjct:   23 ETLSFIRDSLEKSDQLTKNMVSILSSFESRLMKLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDN---SPDSPELNKVKLLFERGKESLESEFRSLMTRHSKVISP 167          
BLAST of EY659169 vs. ExPASy Swiss-Prot
Match: EXOC7_MOUSE (Exocyst complex component 7 OS=Mus musculus GN=Exoc7 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16
Identity = 46/155 (29.68%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  245 EKAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHAIRKAHENIDKTLKAAEVILAQFDLSRQAESKILRGPHEDLESYLEAIDQLRSNISYFSSNKGFKNSEGVINNANTLLVKAISKLEDEFKQLLASYSKPLEPDRLFECL 709
            E  + +R+SL+KS  +T N+V+IL SF+ RL  LE ++ P   +T  +++  EN++KTL   + +++ + ++   E  I  GP   LE YL ++ +++  + YF  N         +N    L  +    LE EF+ L+  +SK + P  L + +
Sbjct:   23 ETLSFIRDSLEKSDQLTRNMVSILSSFESRLMKLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDN---SPDSPELNKVKLLFERGKESLESEFRSLMTRHSKVVSPVLLLDLI 174          
BLAST of EY659169 vs. ExPASy Swiss-Prot
Match: EXOC7_HUMAN (Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  245 EKAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHAIRKAHENIDKTLKAAEVILAQFDLSRQAESKILRGPHEDLESYLEAIDQLRSNISYFSSNKGFKNSEGVINNANTLLVKAISKLEDEFKQLLASYSKPLEP 688
            E  + +R+SL+KS  +T N+V+IL SF+ RL  LE ++ P   +T  +++  EN++KTL   + +++ + ++   E  I  GP   LE YL ++ +++  + YF  N         +N    L  +    LE EF+ L+  +SK + P
Sbjct:   23 ETLSFIRDSLEKSDQLTKNMVSILSSFESRLMKLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDN---SPDSPELNKVKLLFERGKEALESEFRSLMTRHSKVVSP 167          
BLAST of EY659169 vs. ExPASy Swiss-Prot
Match: EXOC7_DICDI (Exocyst complex component 7 OS=Dictyostelium discoideum GN=exoc7 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  260 MRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHAIRKAHENIDKTLKAAEVILAQFDLSRQAESKILRGPHEDLESYLEAIDQLRSNISYFSSNKGFKNSEGVINNANTLLVKAISKLEDEFKQLLASYSKPLEPDRLFECLPNSMR 724
            ++E L+K+ +++  ++ IL  F+  LS LE  + P     +       NI+ T++  + +L +FD+ +  +SKI  G   D  SY+ A++ + + I Y +    FK+S+ V++    L    +++LE  FK LL   S  ++P  + + LPNS R
Sbjct:  217 IKEQLEKNNSMSKQMIYILDRFNEGLSQLEMDVAPINASMNEWSSIFNNINSTMEQVKSVLDKFDVDK-IDSKINDGAKGDYVSYMLALEHVGNAIDYIAEKSHFKSSDKVMDALKQLKATGLNELETSFKSLLLKISNLVDPTTIAK-LPNSKR 369          
The following BLAST results are available for this feature:
BLAST of EY659169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
EXOC7_RAT2.048e-1630.41Exocyst complex component 7 OS=Rattus norvegicus G... [more]
EXOC7_MOUSE2.048e-1629.68Exocyst complex component 7 OS=Mus musculus GN=Exo... [more]
EXOC7_HUMAN3.493e-1630.41Exocyst complex component 7 OS=Homo sapiens GN=EXO... [more]
EXOC7_DICDI8.054e-1329.03Exocyst complex component 7 OS=Dictyostelium disco... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659169 ID=EY659169; Name=EY659169; organism=Citrus sinensis; type=EST; length=906bp
CTCTGCTGAATAATATTTTAATAATATTATTATTTTTAACTTAAAACTTA
ATTATCAAACTGGTACTTACCTCACAACAACCTCAACACACAAAACATTT
TCATCACCAAATTTTATTTTTATTTTTATTTTTTAAAATCAACGAATAAT
TCTCTCTTTGTAGAGAAGAAGCGAGAAGAAGAAGAAGAAGAAGAAGAAGA
TGGTGGTGATGGGAGTAACAGGCATGGAATCGCTTTCTTTAAGCGAGAAA
GCAGCGAAAATGAGAGAGTCGTTGCAAAAGAGCCAAACAATTACAGACAA
TGTCGTCACGATTCTCGGCTCTTTTGATCACCGCCTCTCCGCTCTCGAAA
CCGCCATGCGCCCTACTCAGATAAGAACGCATGCTATTAGAAAGGCTCAT
GAGAATATTGATAAGACTTTGAAGGCTGCTGAGGTTATTTTGGCTCAATT
TGATCTTTCTCGTCAGGCAGAATCTAAAATACTTAGAGGACCACATGAGG
ACCTGGAAAGTTATCTGGAAGCAATTGATCAACTTAGAAGCAACATTAGT
TATTTTAGCAGTAACAAGGGCTTCAAAAATAGTGAGGGGGTGATCAACAA
TGCCAATACTTTACTTGTTAAAGCTATTTCAAAGCTAGAAGACGAGTTTA
AGCAACTATTAGCCTCGTACAGTAAACCATTGGAGCCTGATCGTCTTTTT
GAATGCCTNCCAAATTCAATGCGTNCCTCATCAGGATCACCGGGACACAA
TGGTGATTCTAGCCACAAAAGCCCATCGAATCATCATTCAGAACAGCCAA
ATGGTGATGCAGAAACTGCTGTTTTTACACCTNCTACTCTTATACCACCA
GGATTTTGNNCTTACTGCNATGATTANCCAGCAAATGGTTCAAGCTGGGC
CACACA
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