EY680148

Overview
NameEY680148
Unique NameEY680148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY680148_ssr302 microsatellite EY680148_ssr302:302..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.123e-29
Identity = 65/93 (69.89%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPLSNDY 303
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+GNF  NW+YWV              +VF+ S       DY
Sbjct:  155 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIGSYQPVADQDY 247          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.123e-29
Identity = 65/92 (70.65%), Postives = 72/92 (78.26%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFM-HSEHAPLSN 297
            TVYATAADPKKGSLGTIAP+AIG IVGANILAAGPFSGGSMNPARSFGPAVA+G+F  +W+YWV              NVFM  SEH PL++
Sbjct:  156 TVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLAS 247          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.916e-29
Identity = 68/95 (71.58%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL--SNDY 303
            TVYATAADPKKGSLG IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG+F  NWIYW               +VF+ + HAPL  S DY
Sbjct:  156 TVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFI-TAHAPLPTSEDY 249          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.268e-29
Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPLSN 297
            TVYATAADPKKGSLGTIAPIAIGFIVGANIL AGPFSGGSMNPARSFGPAVASG++ + WIYWV               V+M  +HAP+++
Sbjct:  155 TVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVAS 245          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.622e-28
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 216
            TVYATAADPKKGSLGTIAP+AIGFIVGANILAAGPFSGGSMNPARSFGPAVA+GNF  NW+YWV
Sbjct:  155 TVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWV 218          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.118e-28
Identity = 66/95 (69.47%), Postives = 70/95 (73.68%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL--SNDY 303
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV +G+F  NWIYW               +VF+   H PL  S DY
Sbjct:  156 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIGC-HTPLPTSEDY 249          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.118e-28
Identity = 66/95 (69.47%), Postives = 70/95 (73.68%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL--SNDY 303
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV +G+F  NWIYW               +VF+   H PL  S DY
Sbjct:  156 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIGC-HTPLPTSEDY 249          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.766e-28
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 216
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+G+F  NW+YWV
Sbjct:  155 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWV 218          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.049e-28
Identity = 65/94 (69.15%), Postives = 69/94 (73.40%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHS-EHAPLSNDY 303
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV SG+F   WIYWV              +VF+ S   AP +  Y
Sbjct:  156 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAPAPTTESY 249          
BLAST of EY680148 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.373e-27
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 1
Query:   25 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 216
            TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+ +F  NW+YWV
Sbjct:  156 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWV 219          
The following BLAST results are available for this feature:
BLAST of EY680148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
TIP21_ORYSJ1.123e-2969.89Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH1.123e-2970.65Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP_ANTMA1.916e-2971.58Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP22_ORYSJ4.268e-2969.23Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP23_MAIZE1.622e-2892.19Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP2_TOBAC2.118e-2869.47Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC2.118e-2869.47Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP21_MAIZE2.766e-2892.19Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP22_ARATH8.049e-2869.15Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP22_MAIZE1.373e-2790.63Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-H10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680148 ID=EY680148; Name=EY680148; organism=Citrus sinensis; type=EST; length=854bp
CCCACGCGTCCGCCCACGCGTCCGACGGTCTATGCCACGGCAGCTGACCC
CAAGAAGGGATCATTGGGCACCATTGCACCCATTGCCATCGGTTTCATTG
TCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCCGGTGGTTCCATGAAC
CCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGGCAACTTTCAGGACAA
CTGGATCTACTGGGTTGGCCCTCTCATTGGCGGTGGCCTTGCCGGGCTCA
TCTATGGCAATGTGTTCATGCACTCTGAACATGCACCCCTATCTAATGAC
TATTAATTAATTAGTTAAACTTTGTTTAAAAGTTTAGTTAAATCATTTGA
TCACCTGCTTTTGGCTCTTTCTTTTTTGTAATAAAAGAAGGAAAAGCAGC
TTTGGCTCTTTCTTCTTTTCTTCTTTAGTTTCTTGGTATCCTTCTTTTTA
AATCATTTCTTTTGGAGGTTGTAAAAAGTCTTTGTTGTGGTGGTCCATTG
CGGCTTTTCTGACGATAATGGATGGATTGGGAGACATGCTTGAATGACAC
TCTTTAGTCTTTATCTTCTTGTCNTANANGAAGAAAAAAAAAAAAAAAAA
AAAGGGAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAGGGGGGGGG
GCCCAGGAGAAAGAGACTAAGTTAACCGGGCCGGGAAAGAAAAAACCCCC
CTATGGGGCACCCCGAATACAATTAAAAGGTCCGCGTGTGGGGCGCCCAC
CCAAGGAAAAAACAATATATTACCGGTCTCAAGAACTTCTCCCCTATCAA
CCCCTCCCCCCATTTCGAAGTTGAGGGAAAAAAAGGATAGGCCCCCCTGC
CCGT
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