EY675543

Overview
NameEY675543
Unique NameEY675543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.640e-57
Identity = 112/161 (69.57%), Postives = 130/161 (80.75%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKK 483
            MDEPT GLDARAAAIVMR VR TVDTGRTVVCTIHQPSIDIFEAFDELLL+K GG+VIYAGPLGH SHKL+EYFE +PGVPKI+E+ NPATWML+VS+ S+E QL +DFAEVYA+S+L+QRN+   +     AT       P Q  S  F+TQ +ACFWK+
Sbjct: 1034 MDEPTSGLDARAAAIVMRTVRKTVDTGRTVVCTIHQPSIDIFEAFDELLLMKIGGQVIYAGPLGHRSHKLVEYFETIPGVPKIRESDNPATWMLDVSSSSMEAQLVVDFAEVYANSNLYQRNQLLIKELSTPATCSKDLYFPTQ-YSQSFITQCKACFWKQ 1193          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 6.054e-54
Identity = 109/161 (67.70%), Postives = 125/161 (77.64%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKK 483
            MDEPT GLDARAAAIVMR VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG+VIYAGPLG  SHK+IEYF+A+ GVPKIKE YNPATWMLEVS+++ E +L IDFAE Y  SSL+Q+NK   +    +       L  +   S   L QF++C WK+
Sbjct:  989 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYAGPLGQNSHKIIEYFQAIHGVPKIKEKYNPATWMLEVSSMAAEAKLEIDFAEHYKTSSLYQQNKNLVKEL-STPPQGASDLYFSTRFSQSLLGQFKSCLWKQ 1148          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.614e-53
Identity = 90/122 (73.77%), Postives = 108/122 (88.52%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRN 366
            MDEPT GLDARAAAIVMR V+N  DTGRT+VCTIHQPSIDIFEAFDEL+LLKRGGR+IY GPLG  S  +IEYFE+VP +PKIK+ +NPATWML+VS+ SVE +LG+DFA++Y DS+L++RN
Sbjct: 1025 MDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELVLLKRGGRMIYTGPLGQHSRHIIEYFESVPEIPKIKDNHNPATWMLDVSSQSVEIELGVDFAKIYHDSALYKRN 1146          

HSP 2 Score: 38.891 bits (89), Expect = 2.614e-53
Identity = 22/69 (31.88%), Postives = 37/69 (53.62%), Query Frame = 2
Query:  371 ELIKELNTPPPGSSDLYFPTKYSQPFF*PNLGLVSGKNYWSYWRKPFVTCYPIWAGLLSIAIFFG*IYW 577
            EL+K+L+ P  GSSD+ F   ++Q ++      +  K   SYWR P      +   L+S ++ FG ++W
Sbjct: 1148 ELVKQLSQPDSGSSDIQFKRTFAQSWW-GQFKSILWKMNLSYWRSPSYNLMRMMHTLVS-SLIFGALFW 1214          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.924e-53
Identity = 107/169 (63.31%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLT--------QFRACFWKK 483
            MDEPT GLDARAAAIVMR VRNTVDTGRTVVCTIHQPSIDIFEAFDELLL+KRGG VIY+GPLG  SHK++EYFE+ PGVPKI E YNPATWMLE S+++ E +LG+DFAE+Y  S+L QRNK   Q           S+ P       F T        QF++C WK+
Sbjct: 1015 MDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGHVIYSGPLGRNSHKVVEYFESFPGVPKIPEKYNPATWMLEASSLAAELKLGVDFAELYKASALCQRNKALVQEL---------SVPPQGATDLYFATQFSQNTWGQFKSCLWKQ 1174          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.947e-52
Identity = 102/161 (63.35%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKK 483
            MDEPT GLDARAAAIVMR VRNTVDTGRTVVCTIHQPSIDIFEAFDEL+L+KRGG+VIYAGPLG  SHK++EYFE+ PGV KI E YNPATWMLE S+++ E +L +DFAE+Y  S+LHQRNK   +                Q     +  QF++C WK+
Sbjct: 1042 MDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELMLMKRGGQVIYAGPLGQNSHKVVEYFESFPGVSKIPEKYNPATWMLEASSLAAELKLSVDFAELYNQSALHQRNKALVKELSVPPAGASDLYFATQFSQNTW-GQFKSCLWKQ 1201          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.543e-52
Identity = 106/163 (65.03%), Postives = 123/163 (75.46%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKKLL 489
            MDEPT GLDARAAAIVMR VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG+VIY+G LG  S K+IEYFEA+PGVPKIK+ YNPATWMLEVS+++ E +L +DFAE Y  S L+++NK    +             P +  S   + QFRAC WK+ L
Sbjct: 1074 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGQLGRNSQKMIEYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLNMDFAEYYKTSDLYKQNKVLVNQLSQPEPGTSDLHFPTK-YSQSTIGQFRACLWKQWL 1235          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.338e-52
Identity = 104/161 (64.60%), Postives = 122/161 (75.78%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKK 483
            MDEPT GLDARAAAIVMR VRNTV+TGRTVVCTIHQPSIDIFEAFDELLLLKRGG+VIY+GPLG  SHK++EYFEA+PGVPKI+E  NPATWML+VS+ + E +L IDFAE Y  S++HQR K   +              P+Q   + F  QF+ C WK+
Sbjct: 1083 MDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGTNSHKVVEYFEAIPGVPKIEENRNPATWMLDVSSAASEVRLEIDFAEYYRSSTMHQRTKALVKELSNPPPGSDDLYFPSQYSQSTF-NQFKLCLWKQ 1242          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.666e-52
Identity = 104/162 (64.20%), Postives = 128/162 (79.01%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGS--LLPNQILSTIFLTQFRACFWK 480
            MDEPT GLDARAAAIVMR VRNTVDTGRTVVCTIHQPSIDIFE+FDELLL+KRGG+VIYAG LGH S KL+EYFEA+ GVPKIK+ YNPATWML+V+  S+E+Q+ +DFA+++ +SS+++RN+   +     +T   GS  L      +  F TQ +ACFWK
Sbjct: 1027 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYAGTLGHHSQKLVEYFEAIEGVPKIKDGYNPATWMLDVTTPSMESQMSVDFAQIFVNSSVNRRNQELIKEL---STPPPGSNDLYFRTKYAQPFSTQTKACFWK 1185          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.400e-52
Identity = 105/163 (64.42%), Postives = 120/163 (73.62%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKKLL 489
            MDEPT GLDARAAAIVMR VRNTV+TGRTVVCTIHQPSIDIFEAFDEL L+KRGG  IYAGPLGH S +LI+YFE++PGV KIK+ YNPATWMLEV+ I  E  LG+DF+++Y  S L+QRNK   +     A        P Q  S   LTQ  AC WK+ L
Sbjct: 1035 MDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYAGPLGHHSSELIKYFESIPGVSKIKDGYNPATWMLEVTTIGQEQALGVDFSDIYKKSELYQRNKALIKDLSQPAPDSSDLYFPTQ-YSQSSLTQCMACLWKQNL 1196          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.400e-52
Identity = 105/163 (64.42%), Postives = 120/163 (73.62%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQILSTIFLTQFRACFWKKLL 489
            MDEPT GLDARAAAIVMR VRNTV+TGRTVVCTIHQPSIDIFEAFDEL L+KRGG  IYAGPLGH S +LI+YFE++PGV KIK+ YNPATWMLEV+ I  E  LG+DF+++Y  S L+QRNK   +     A        P Q  S   LTQ  AC WK+ L
Sbjct: 1035 MDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYAGPLGHHSSELIKYFESIPGVSKIKDGYNPATWMLEVTTIGQEQALGVDFSDIYKKSELYQRNKALIKDLSQPAPDSSDLYFPTQ-YSQSSLTQCMACLWKQNL 1196          
The following BLAST results are available for this feature:
BLAST of EY675543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
PDR2_NICPL7.640e-5769.57Pleiotropic drug resistance protein 2 OS=Nicotiana... [more]
AB29G_ARATH6.054e-5467.70ABC transporter G family member 29 OS=Arabidopsis ... [more]
AB37G_ARATH2.614e-5373.77ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB35G_ARATH3.924e-5363.31ABC transporter G family member 35 OS=Arabidopsis ... [more]
AB36G_ARATH1.947e-5263.35ABC transporter G family member 36 OS=Arabidopsis ... [more]
PDR12_ORYSJ2.543e-5265.03Pleiotropic drug resistance protein 12 OS=Oryza sa... [more]
PDR15_ORYSJ4.338e-5264.60Pleiotropic drug resistance protein 15 OS=Oryza sa... [more]
AB34G_ARATH5.666e-5264.20ABC transporter G family member 34 OS=Arabidopsis ... [more]
PDR3_ORYSJ7.400e-5264.42Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]
PDR3_ORYSI7.400e-5264.42Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-A04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675543 ID=EY675543; Name=EY675543; organism=Citrus sinensis; type=EST; length=964bp
ATGGATGAGCCTACCCCTGGGCTTGATGCTAGAGCTGCTGCTATTGTCAT
GCGTCCTGTTAGAAATACAGTGGATACAGGGAGAACAGTTGTGTGTACAA
TCCACCAGCCAAGCATAGACATTTTTGAAGCATTTGACGAGCTATTGTTG
TTGAAAAGAGGGGGCCGCGTCATTTATGCTGGACCTCTTGGTCACGAATC
TCACAAGCTCATAGAGTATTTTGAGGCTGTTCCAGGGGTTCCTAAAATTA
AGGAAGCATACAATCCTGCAACATGGATGCTGGAGGTCAGTAACATTTCA
GTTGAGAATCAACTGGGAATTGATTTTGCTGAAGTTTATGCCGATTCATC
GCTTCATCAGAGGAATAAAGGAACTTATCAAAGAGCTTAATACTCCGCCA
CCTGGCTCGTCGGATCTCTACTTCCCAACCAAATACTCTCAACCATTTTT
TTAACCCAATTTAGGGCTTGTTTCTGGAAAAAATTATTGGTCTTATTGGA
GAAAACCCTTCGTAACATGCTATCCGATTTGGGCAGGACTCCTGTCCATT
GCAATTTTCTTTGGGTAAATCTACTGGGGGAACAAAGGAAAAAAAAAATT
TCCAAAAAAACAAGATCGGGCAAAAACTTTTTTGGAAACTTAGGAATTTT
ATTTTGTAATTTTTTCCTTGGGAAACCCACGAAAGGCCTTTAGCCCTGGA
ATACCCGGTTAAAACGGCAGTTTTGAGAAAAAAAAGTTAATGATTATCCG
TGAAAGAAAAAACTGCAAGGGGAAGCGCGGTGGGAGAGAAGAATGTAAAC
GAATAAAACATATGGGGACAGAAATGAAGGAACGAGACAAATAAAGAAAA
AAGTAATAAATGTCTATCCAAATGAATACGACAAGAGGTGGTGAGTGAAT
GACGCTGTATGACAGAAAAATGAAAACAAATTCGTGTGAGTGTCGACTGG
GAGGGATGCAATGG
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