EY675538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC3_SCHPO (Replication factor C subunit 3 OS=Schizosaccharomyces pombe GN=rfc3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.475e-30 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSL 490 PWVEKYRP +L DV +H+DI+ T+++ S NR+PH+L YGPPGTGKTSTILA ARK+YG Y N ++EL+ASDD+GID VR+QI++F T+ + Sbjct: 24 PWVEKYRPANLEDVVSHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILACARKIYGPNYRNQLMELNASDDRGIDAVREQIKNFASTRQI 116
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC5_DICDI (Probable replication factor C subunit 5 OS=Dictyostelium discoideum GN=rfc5 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.781e-29 Identity = 60/87 (68.97%), Postives = 70/87 (80.46%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 PWVEKYRP++L D+ AH DI TI +L N LPHLL YGPPGTGKTSTI A+ARKLYG Y M+LEL+ASDD+GIDVVR+QI+ F Sbjct: 25 PWVEKYRPKNLDDLIAHEDITQTITKLIDNNTLPHLLFYGPPGTGKTSTIQAIARKLYGDNYSRMVLELNASDDRGIDVVREQIKTF 111
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC3_YEAST (Replication factor C subunit 3 OS=Saccharomyces cerevisiae GN=RFC3 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.057e-28 Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSLLIWG 502 PWVEKYRP++L +V +++ T+ + E +LPHLL YGPPGTGKTSTI+A+AR++YG Y NM+LEL+ASDD+GIDVVR QI+DF T+ + G Sbjct: 14 PWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG 110
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC3_ARXAD (Replication factor C subunit 3 OS=Arxula adeninivorans GN=RFC3 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.355e-28 Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSLLIWG 502 PWVEKYRP +L +VA H ++ TI + E +LPHLL +GPPGTGKT+TI+AVAR++YG Y NMILEL+ASD++GIDVVR QI+ F T+ + G Sbjct: 18 PWVEKYRPTTLDEVAGHEGVITTIKKFVEEGKLPHLLFHGPPGTGKTTTIIAVARQIYGKNYRNMILELNASDERGIDVVRDQIKTFASTRQIFSSG 114
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC5_MOUSE (Replication factor C subunit 5 OS=Mus musculus GN=Rfc5 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 5.246e-28 Identity = 59/94 (62.77%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY-GAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSL 490 PWVEKYRPQ+LAD+ +H+DI+ TI + SE+RLPHLLLYGPPGTGKTSTILA A++LY ++ +M+LEL+ASDD+GID+VR I F T+++ Sbjct: 20 PWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTI 113
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC5_HUMAN (Replication factor C subunit 5 OS=Homo sapiens GN=RFC5 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.441e-27 Identity = 57/98 (58.16%), Postives = 79/98 (80.61%), Query Frame = 2 Query: 200 IKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY-GAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSL 490 I+ PWVEKYRPQ+L D+ +H+DI+ TI + +E+RLPHLLLYGPPGTGKTSTILA A++LY ++ +M+LEL+ASDD+GID++R I F T+++ Sbjct: 17 IRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTI 114
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC2_PHANO (Replication factor C subunit 2 OS=Phaeosphaeria nodorum GN=RFC2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.281e-23 Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 143 NLKPKDNGKNVIVSGTPPDIKAS-----PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-YHNMILELSASDDKGIDVVRQQIQDFGYTQSLL--IWG*RAQSKRGLLGGGRMPWTKEAQFCPWVKVI 592 NLK + S P K PWVEKYRP++L++V A + + + R + LPH+L YGPPGTGKTSTILA+A++LYG + + +LEL+ASD++GI +VRQ+++DF Q + + + K G G +M ++ CP K+I Sbjct: 6 NLKARQQAAAQASSSKTPTSKQESNRLQPWVEKYRPKTLSEVTAQDNTIQILSRTLQSSNLPHMLFYGPPGTGKTSTILALAKQLYGPELMKSRVLELNASDERGISIVRQKVKDFARQQLSVAPTYNVMTEDKDG--GEAKMVRYRDKYSCPPFKII 161
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC5_CAEEL (Probable replication factor C subunit 5 OS=Caenorhabditis elegans GN=F44B9.8 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 5.081e-23 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG-AQYHNMILELSASDDKGIDVVRQQIQDFGYTQSL 490 PWVEKYRP L ++ AH IV T+ + LPHLL YGPPGTGKT+T+LA AR++Y + +M+LEL+ASD++GIDVVR I +F T+ L Sbjct: 30 PWVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARQMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGL 123
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_SULTO (Replication factor C small subunit OS=Sulfolobus tokodaii GN=rfcS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 4.755e-21 Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYT 481 W EKYRP+SL D+ +DIV+ + R + +PHLL GPPGTGKT+ LA+ LYG Y LEL+ASD++GIDV+R ++++F T Sbjct: 9 WAEKYRPRSLDDIVNQKDIVERLKRFVKDKNMPHLLFSGPPGTGKTTAALALVHDLYGDNYRQYFLELNASDERGIDVIRNKVKEFART 97
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_SULSO (Replication factor C small subunit OS=Sulfolobus solfataricus GN=rfcS PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.059e-20 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYT 481 W EKYRP++L D+ R+I+D + + E +PHLL GPPGTGKT+ LA+ LYG Y LEL+ASD++GIDV+R ++++F T Sbjct: 10 WAEKYRPKTLDDIVNQREIIDRLKKFVKEKNMPHLLFAGPPGTGKTTAALALVHDLYGDNYTEYFLELNASDERGIDVIRNKVKEFART 98 The following BLAST results are available for this feature:
BLAST of EY675538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675538 ID=EY675538; Name=EY675538; organism=Citrus sinensis; type=EST; length=1095bpback to top |