EY675532

Overview
NameEY675532
Unique NameEY675532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_ARATH (Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 3.219e-61
Identity = 131/214 (61.21%), Postives = 148/214 (69.16%), Query Frame = 1
Query:   31 LKLRTNLCRGRVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKKSPPRGQPNRGR 672
            L+LR   CRG V +M H K    V ASVQP E S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+E              ISGG      NP+AS+  GIP E  +   N  F  SGE LGF    EPTSR G K+    Q  +GR
Sbjct:   29 LELRRYPCRGLVSIMNHPKLLRPVTASVQPHELSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGGFRQM-INPVASI-LGIPREN-IFANNLLFGNSGEFLGF-DENEPTSRSGGKAKAVQQIRKGR 238          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_RAT (Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.717e-25
Identity = 69/157 (43.95%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  169 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKK 639
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  RL+L +PS  QVQ  L + PP L+PGI E              ISGG  S   +  A +     P   +      F  +GE  GF    +PT+  G K
Sbjct:    6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTERLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLN---IPTTNVFANRLKFYFNGEYAGF-DETQPTAESGGK 158          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_MOUSE (Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.717e-25
Identity = 69/157 (43.95%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  169 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKK 639
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  RL+L +PS  QVQ  L + PP L+PGI E              ISGG  S   +  A +     P   +      F  +GE  GF    +PT+  G K
Sbjct:    6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQRLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLN---IPTTNVFANRLKFYFNGEYAGF-DEMQPTAESGGK 158          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_BOVIN (Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.845e-24
Identity = 68/157 (43.31%), Postives = 88/157 (56.05%), Query Frame = 1
Query:  169 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKK 639
            E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  RL+L +PS  QVQ  L + PP L+PGI E              ISGG  S   +  + +     P   +      F  +GE  GF    +PT+  G K
Sbjct:    6 ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQRLALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPSTNVFANRLKFYFNGEYAGF-DETQPTAESGGK 158          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_PONAB (Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.110e-24
Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 1
Query:  169 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKK 639
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  RL+L +PS  QVQ  + ++PP L+PGI E              ISGG  S   +  + +     P   +      F  +GE  GF    +PT+  G K
Sbjct:    6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPATNVFANRLKFYFNGEYAGF-DETQPTAESGGK 158          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_HUMAN (Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 4.110e-24
Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 1
Query:  169 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKK 639
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  RL+L +PS  QVQ  + ++PP L+PGI E              ISGG  S   +  + +     P   +      F  +GE  GF    +PT+  G K
Sbjct:    6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPATNVFANRLKFYFNGEYAGF-DETQPTAESGGK 158          
BLAST of EY675532 vs. ExPASy Swiss-Prot
Match: SERB_DROME (Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.020e-20
Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  127 ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXXXISGGLPSYGSNPIASVPRGIPPEKYLLPTNCCFKISGEVLGFWRPKEPTSREGKKS 642
            ASA+   +    + +V+Q    +  VCFDVDSTV  +EGIDELAE+CG G  VA  T  AMGG++ F++AL  RL++ +P+  QV+DF+++RP  LS  +                ISGG     + P+A+   GI P K +      F   GE   F    +PTSR G K+
Sbjct:   42 ASAITPPKQPQLAAKVIQ---QSQIVCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNIIRPTQQQVRDFIQERPSTLSKNVKRFVSHLKAEGKQVYLISGGFDCLIA-PVAN-ELGI-PLKNVYANKMLFDYLGEYDSF-DINQPTSRSGGKA 206          
The following BLAST results are available for this feature:
BLAST of EY675532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SERB_ARATH3.219e-6161.21Phosphoserine phosphatase, chloroplastic OS=Arabid... [more]
SERB_RAT3.717e-2543.95Phosphoserine phosphatase OS=Rattus norvegicus GN=... [more]
SERB_MOUSE3.717e-2543.95Phosphoserine phosphatase OS=Mus musculus GN=Psph ... [more]
SERB_BOVIN1.845e-2443.31Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE... [more]
SERB_PONAB4.110e-2442.68Phosphoserine phosphatase OS=Pongo abelii GN=PSPH ... [more]
SERB_HUMAN4.110e-2442.68Phosphoserine phosphatase OS=Homo sapiens GN=PSPH ... [more]
SERB_DROME8.020e-2038.37Phosphoserine phosphatase OS=Drosophila melanogast... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-011-H02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675532 ID=EY675532; Name=EY675532; organism=Citrus sinensis; type=EST; length=1015bp
CCACGCGTCCGTTTTATTCCGAAATTTTCCTTGAAATTGAGGACAAATTT
ATGTAGAGGTCGAGTTGGGATGATGAAGCATTCTAAATCATTCAATTCCG
TTGCTGCTTCAGTGCAACCATTAGAAGCCTCGGCATTGGGCCGTTCTGAG
AACACACTGCCCTCCAAAGAGGTTCTTCAGCTGTGGAGAACTGCTGATGC
GGTGTGCTTCGATGTTGATAGCACGGTATGTGTAGATGAGGGCATTGATG
AACTTGCGGAATTTTGTGGAGCTGGAAAGGCTGTTGCGGAATGGACTGCC
AGGGCAATGGGGGGGTCTGTTCCGTTCGAGGAGGCCTTGGCTGCCAGACT
TTCCTTGTTCAAACCTTCATTGTCCCAAGTCCAGGATTTTCTTGAGAAGA
GACCCCCTAGGCTCTCACCTGGCATAGATGAGTTGGTCAAGAAGCTGAAG
GCTAACAATAAGAATGTTAATCTGATCTCTGGGGGGCTTCCGTCATATGG
ATCAAATCCTATTGCATCAGTCCCTCGGGGAATTCCCCCGGAAAAATATC
TTTTGCCAACCAACTGCTGTTTTAAAATTTCTGGGGAAGTTTTGGGGTTT
TGGAGGCCCAAGGAACCTACCTCAAGGGAAGGGAAGAAAAGCCCGCCGCG
TGGGCAACCAAATAGGGGAAGGGCCCTATGCAAAAAGGGGACCTTGCCCA
AGAATGGGGGAAAGGGACCTAACGAATCTGGAAGGGCCCTAAACCCCAGG
AGGGGCCAAACTTTGTTTAATTATTTTATAGGGGGTGTATAAACTTTCCA
AAAGGGCCAATTCCCGCCCAAAAAAATAATTGGGGCGGGTTGCTATCAAT
CTAAAAGTATAATGAGAACGCCCCCAGAAAGAAATATACCTTCATGGGAG
GGAATATTTTGTCGCCGAGTATATCCGCCAGTGCCCCACACCACCACCAG
AGGGGTGTCTGATGTAGGTGCGCACGTGGGGTGATTGATGGAGAGGAAGA
AAAATAACTGGCCGT
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