EY675531

Overview
NameEY675531
Unique NameEY675531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1053
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675531 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.441e-16
Identity = 46/130 (35.38%), Postives = 58/130 (44.62%), Query Frame = 1
Query:    4 SWGMPLLRH----MQRNTGNSLPFSGINMLASYPTKTGQNXXXXXXXXX------TRCSLLTYCAARETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRFTGNVTGTEAIE 363
            SWG     +    +QRN  +S    G+ +  SYP KTG N               T C   + CA   TCCC       C SW CC    A CC DH  CCP +YPIC +VR    +   GN  G +A++
Sbjct:  199 SWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPIC-NVRQGTCSMSKGNPLGVKAMK 327          
BLAST of EY675531 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.165e-15
Identity = 41/116 (35.34%), Postives = 50/116 (43.10%), Query Frame = 1
Query:    7 WGMPLLRHMQRNTGNSLPFSGINMLASYPTKTGQNXXXXXXXXXTR------------CSLLTYCAARETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQC 318
            WG      M+RN   +    GI M+ASYPTK+G N         T             C     C A  TCCC      +CL W CC    A CC DH  CCP +YP+C++    C
Sbjct:  328 WGESGYVRMERNINVTTGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTC 443          
BLAST of EY675531 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.165e-15
Identity = 39/108 (36.11%), Postives = 47/108 (43.52%), Query Frame = 1
Query:    7 WGMPLLRHMQRNTGNSLPFSGINMLASYPTKTGQNXXXXXXXXXT----RCSLLTYCAARETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQC 318
            WG      M+RN        GI M+ASYP K G N              +C   + C A  TCCC   I   C+ W CC    A CC DH  CCP  YP+C++    C
Sbjct:  345 WGENGYIRMERNVTARTGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQCDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTC 452          
BLAST of EY675531 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.083e-14
Identity = 39/113 (34.51%), Postives = 49/113 (43.36%), Query Frame = 1
Query:    1 RSWGMPLLRHMQRNTGNSLPFSGINMLASYPTKTGQNXXXXXXXXX------TRCSLLTYCAARETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCL 321
            +SWG      M RN  +S    GI +  SYP K G+N               T+C     C    TCCC       C +W CC   +A CC D+  CCP  YP+CD  +  CL
Sbjct:  321 KSWGESGYLRMARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCL 433          
BLAST of EY675531 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.515e-13
Identity = 40/113 (35.40%), Postives = 47/113 (41.59%), Query Frame = 1
Query:    1 RSWGMPLLRHMQRNTGNSLPFSGINMLASYPTKTGQNXXXXXXXXX------TRCSLLTYCAARETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCL 321
            +SWG      M+RN   S    GI +  SYP K G+N               T C     C    TCCC       C +W CC    A CC DH  CCP  YPIC+  +  CL
Sbjct:  313 KSWGESGYVRMERNIKASSGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCL 425          
The following BLAST results are available for this feature:
BLAST of EY675531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CYSPL_SOLLC7.441e-1635.38Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ2.165e-1535.34Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.165e-1536.11Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH4.083e-1434.51Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ4.515e-1335.40Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-011-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675531 ID=EY675531; Name=EY675531; organism=Citrus sinensis; type=EST; length=1053bp
AGAAGTTGGGGAATGCCCCTCTTAAGGCACATGCAACGTAACACTGGCAA
TTCACTACCCTTCAGTGGTATCAACATGCTAGCTTCATATCCGACTAAGA
CCGGCCAAAATCCACCTCCCTCCCCTCCTCCTGGTCCGACAAGATGCAGT
CTTCTTACTTATTGTGCAGCAAGAGAAACCTGTTGTTGTGGGAGCAGCAT
TTTAGGAATATGCTTGTCATGGAAATGTTGTGGGTTCAGTTCCGCTGTGT
GTTGTTCGGATCACCGTTATTGCTGCCCCTCAAACTATCCAATTTGTGAT
TCTGTCAGACACCAGTGCCTTACGCGGTTTACAGGGAATGTAACTGGCAC
TGAAGCAATTGAGATGAAAGGGCTCATCATGGAAGTTTGGGAGTTGGAGT
TTCCTTCATTGATGGGGGGGTGGGAAAAAGTGAACTGGAATCTGGGTTAA
AGGGCCATTATAAGTACCAAGACTTGGTATATGGGGATGCAAAGAAAAGG
TGTAGTTATAGGTTCCAGGTTCTGGTAAAGTAGAGCCAAGAGTAGTGGGG
GACTGGGAGTGGGGCGGGCAACTGGGGGTGAGAAAGAATTCAAGAAGGTA
GAATAATTAAGGGAGAGGCTAATTGCCAAAGTAGATGGAATGTGGATGGA
AAAGAGAGGGCAGGAAAAGTACCCCCCAGGTGAGGGCGATGGGTTAAAGG
TTGGAGTAGGACGAAGAAGTATAGAAAGAGACATAAAAAAAGAAAGGGGG
GGGACGGAGTATGGAGAAGTCTGAAAGACATAAGTAATTGTGGGGGTGCG
GAAAGACAAGAAAAATGATTTAAATTACAATTAGCCATTTAAGTATATAT
TGGGGCCAAATAGGATTGTGTATAAGTAGAAGAAAGTGGGGAGGCAGGGG
ATAGAATAGGATCAAGGTTTTATGGCTAGAGTATTTAAGATGTATTTAGT
TTGGTAAGACTGGATAACACTTCAAGTTAGAATGGCATGGGTGTGATGAT
AGAGTCGGGATTTGAATAATAGGAGAAAGATAAAAAGAGATGATGNGACG
GTG
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