EY675369

Overview
NameEY675369
Unique NameEY675369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675369 vs. ExPASy Swiss-Prot
Match: ZMAT2_MOUSE (Zinc finger matrin-type protein 2 OS=Mus musculus GN=Zmat2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.962e-25
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query:  118 FRRKFDXXXXXXXXXXXXXXXADGRSKSKAKG-PPVQRKPLKHRDYVVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHIKGKKHQRALGMSMR 429
            FRRK+D                + R K   K   PV+R+ L+HRDY VDLES+LGKT V+T   P S+  GYYC+VC+CVVKDS N+LDHI GKKHQR LGMSMR
Sbjct:   12 FRRKWDKDEYEKLAEKRL---TEEREKKDGKPVQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMR 113          

HSP 2 Score: 24.6386 bits (52), Expect = 6.962e-25
Identity = 13/34 (38.24%), Postives = 21/34 (61.76%), Query Frame = 2
Query:  431 VERASLDQVRERF*IAQERRKSPGSFSEQDLGER 532
            VER++LDQV++RF +   ++K      + D  ER
Sbjct:  114 VERSTLDQVKKRFEV--NKKKMEEKQKDYDFEER 145          
BLAST of EY675369 vs. ExPASy Swiss-Prot
Match: ZMAT2_HUMAN (Zinc finger matrin-type protein 2 OS=Homo sapiens GN=ZMAT2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.962e-25
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query:  118 FRRKFDXXXXXXXXXXXXXXXADGRSKSKAKG-PPVQRKPLKHRDYVVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHIKGKKHQRALGMSMR 429
            FRRK+D                + R K   K   PV+R+ L+HRDY VDLES+LGKT V+T   P S+  GYYC+VC+CVVKDS N+LDHI GKKHQR LGMSMR
Sbjct:   12 FRRKWDKDEYEKLAEKRL---TEEREKKDGKPVQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMR 113          

HSP 2 Score: 24.6386 bits (52), Expect = 6.962e-25
Identity = 13/34 (38.24%), Postives = 21/34 (61.76%), Query Frame = 2
Query:  431 VERASLDQVRERF*IAQERRKSPGSFSEQDLGER 532
            VER++LDQV++RF +   ++K      + D  ER
Sbjct:  114 VERSTLDQVKKRFEV--NKKKMEEKQKDYDFEER 145          
BLAST of EY675369 vs. ExPASy Swiss-Prot
Match: YO14_CAEEL (Putative zinc finger protein ZK686.4 OS=Caenorhabditis elegans GN=ZK686.4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.471e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1
Query:  196 KSKAKGPPVQRKPLKHRDYVVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHIKGKKHQRALGMSMR 429
            K K   P V+R+ L+ R+Y VDL+S++GK+ V+T   P ++  G+YC VC+CVVKDS N+LDHI GK HQR +GMSM+
Sbjct:  236 KKKKDEPKVKREMLQAREYKVDLDSKVGKSVVITKATPSAETGGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMK 313          
The following BLAST results are available for this feature:
BLAST of EY675369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZMAT2_MOUSE6.962e-2555.24Zinc finger matrin-type protein 2 OS=Mus musculus ... [more]
ZMAT2_HUMAN6.962e-2555.24Zinc finger matrin-type protein 2 OS=Homo sapiens ... [more]
YO14_CAEEL2.471e-1953.85Putative zinc finger protein ZK686.4 OS=Caenorhabd... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-F07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675369 ID=EY675369; Name=EY675369; organism=Citrus sinensis; type=EST; length=1054bp
ATTTGTTTTTCCGATATTTCCATTGTCATTCATGTTACTTGCAACTCTCT
CTTTCGAGCTCCATTTCAGTTGCCTTAATCAATGGCTGATAACAACCCTG
CTGGAGTTGATAACACTTTCAGAAGAAAATTCGATCGAGAAGAGTACTTA
GAACGCGCTCGCGAACGTGAAAGAGAAGAGGCGGATGGTCGGTCTAAATC
GAAAGCAAAAGGTCCTCCAGTGCAAAGGAAACCCTTGAAGCATAGGGACT
ATGTAGTTGACCTTGAATCTCGATTGGGCAAAACCCAAGTTGTTACTCCA
ATAGCTCCTTTAAGCCAACAGGCTGGATACTACTGTTCCGTTTGCGAGTG
TGTAGTTAAGGATTCAGCTAACTACTTGGATCATATAAAGGGGAAAAAAC
ATCAAAGAGCTTTGGGTATGTCTATGCGGGGTTGAACGAGCATCTCTTGA
CCAGGTCCGTGAGCGATTTTGAATTGCTCAAGAAAGAAGAAAGTCCCCTG
GGAGCTTCTCAGAACAGGATCTTGGAGAGCGGATTATAAAACAGCAGGAA
GAAAAAAAGGAAACGGGAAGGCTCCAACGTCGAAGAGAAAAAAAAAAAGA
AAAAAAAGAAAGAAAAGGCACCTGGTAAAAAAAGGAAACGGAAAATGGGA
TCCCGGAACTTTGGGGGCAATGATGGGATTTGGGCAGCCTTCTATTTAGC
TGAAAAAAAGGTTTATTTTTCCCTCCCCCCGTTTTTGGATTATTTTTTCC
CGGGAAAGGGGGCCCCCCCCCTGGGACTTGTTTTTTTTTGTAAATGAAAG
CCCCGGGGTTTCGTATAAGAAGACATTGGAGATTTTTGGGGTTTTTTTTT
TTTGGGGAAAACAACCCACCTTTATTGCGGCGTGGGGTACGACTCCTCCC
CGCCACATATTCGAAAGATTTGAAAACACGCCCTTATTATATTATGGAGG
GGCGCAAGGGACAGAAATCTTAGGTAAATACCAAGAGAAGAGTGTGTTAG
ACAGGGAAAAGGGAACAAAAAAAATTATTATTTTTTTTTTTTCTATTCTC
ACAA
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