EY675364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: EXOS4_MOUSE (Exosome complex exonuclease RRP41 OS=Mus musculus GN=Exosc4 PE=2 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 3.117e-40 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +ALV C+YS A+FSTG+R +P GDR+S E+ L +RQT EA ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP Sbjct: 69 RALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLP 191
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: EXOS4_HUMAN (Exosome complex exonuclease RRP41 OS=Homo sapiens GN=EXOSC4 PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 5.317e-40 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +ALV C+YS A+FSTG+R +P GDR+S E+ L +RQT EA ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP Sbjct: 69 RALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLP 191
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: EXOS4_BOVIN (Exosome complex exonuclease RRP41 OS=Bos taurus GN=EXOSC4 PE=2 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 5.317e-40 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +ALV C+YS A+FSTG+R +P GDR+S E+ L +RQT EA ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP Sbjct: 69 RALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLP 191
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_PYRKO (Probable exosome complex exonuclease 1 OS=Pyrococcus kodakaraensis GN=TK1634 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.593e-32 Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +A++R Y+MA FS +R KP DRRS EIS VIR +E +L H+ PR+ ID+F+++LQAD GTR A I AA+LAL DAGIPM+D+V +C+AG ++ +LDLN ED+ G DV V I+P Sbjct: 72 RAILRVRYNMAPFSVEERK-KPGPDRRSVEISKVIRGALEPALLLHMFPRTAIDVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEEDNYGEADVPVAIMP 193 HSP 2 Score: 34.2686 bits (77), Expect = 1.593e-32 Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 +TLLQMD L + F ++LAI+G KAV R ++ +Y Sbjct: 198 ITLLQMDGYLTKDEFLEAVRLAIKGAKAVYQKQREALKEKY 238
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_THEON (Probable exosome complex exonuclease 1 OS=Thermococcus onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.968e-32 Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +A++R Y+MA FS +R KP DRRS EIS VIR +E ++ + PR+ IDIF++VLQAD GTR A I AA+LAL DAGIPMRD+V +C+AG + +LDLN ED+ G DV V I+P Sbjct: 72 RAILRVRYNMAPFSVEERK-KPGPDRRSVEISKVIRGALEPALILEMFPRTAIDIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMP 193 HSP 2 Score: 34.6538 bits (78), Expect = 5.968e-32 Identity = 18/49 (36.73%), Postives = 27/49 (55.10%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREYQAVGMPPG 530 +TLLQMD L + F ++LAI+G KAV R ++ +Y + G Sbjct: 198 ITLLQMDGYLTRDEFIEAVRLAIKGAKAVYQKQREALKEKYLKIAEEVG 246
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_PYRFU (Probable exosome complex exonuclease 1 OS=Pyrococcus furiosus GN=PF1568 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 7.772e-32 Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +A++R Y+MA FS +R KP DRRS EIS VIR +E ++ + PR+ ID+F++VLQAD GTR A I AA+LAL DAGIPMRD+V +CSAG + +LDLN ED+ G DV V I+P Sbjct: 72 RAILRVRYNMAPFSVEERK-KPGPDRRSIEISKVIRGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDNYGEADVPVAIMP 193 HSP 2 Score: 33.8834 bits (76), Expect = 7.772e-32 Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 +TLLQMD L F ++LAI+G KAV R ++ +Y Sbjct: 198 ITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEKY 238
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_PYRHO (Probable exosome complex exonuclease 1 OS=Pyrococcus horikoshii GN=PH1549 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.911e-31 Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +A++R Y+MA FS +R KP DRRS EIS VI+ +E ++ + PR+ ID+F++VLQAD GTR A I AA+LAL DAGIPMRD+V +C+AG + +LDLN ED+ G DV V I+P Sbjct: 72 RAILRVRYNMAPFSVEERK-KPGPDRRSIEISKVIKGALEPALILEMFPRTSIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMP 193 HSP 2 Score: 33.8834 bits (76), Expect = 2.911e-31 Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 +TLLQMD L F ++LAI+G KAV R ++ +Y Sbjct: 198 ITLLQMDGYLTKEEFIEAVRLAIKGAKAVYQKQREALKEKY 238
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_PYRAB (Probable exosome complex exonuclease 1 OS=Pyrococcus abyssi GN=PYRAB06100 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.911e-31 Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 +A++R Y+MA FS +R KP DRRS EIS VI+ +E ++ + PR+ ID+F++VLQAD GTR A I AA+LAL DAGIPMRD+V +C+AG + +LDLN ED+ G DV V I+P Sbjct: 72 RAILRVRYNMAPFSVEERK-KPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMP 193 HSP 2 Score: 34.2686 bits (77), Expect = 2.911e-31 Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 +TLLQMD L + F ++LAI+G KAV R ++ +Y Sbjct: 198 ITLLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREALKEKY 238
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_THEGJ (Probable exosome complex exonuclease 1 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2036 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.936e-31 Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 2 Query: 5 ALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP 370 A++R Y+MA FS +R KP DRRS EIS VIR +E ++ + PR+ +D+F++VLQAD GTR A I AA+LAL DAG+PMRD+V +C+AG ++ +LDLN ED+ G DV V I+P Sbjct: 73 AVLRVRYNMAPFSVEERK-KPGPDRRSVEISKVIRGALEPALILEMFPRTVVDVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDNYGEADVPVAIMP 193 HSP 2 Score: 33.8834 bits (76), Expect = 4.936e-31 Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 Query: 384 VTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 +TLLQMD L F ++LAI+G KAV R ++ +Y Sbjct: 198 ITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEKY 238
BLAST of EY675364 vs. ExPASy Swiss-Prot
Match: ECX1_METTH (Probable exosome complex exonuclease 1 OS=Methanobacterium thermoautotrophicum GN=MTH_683 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.377e-31 Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 2 Query: 2 QALVRCEYSMASFSTGDRMTKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILP-TLDKSYSSSDG 403 +A++RC Y+MA FS +R +P DRRS EIS + + + ++ PRS ID+F++VL+A+GGTR A I AA++AL DAGIPMRD+V +C+AG + +LDL+ ED G DV V ILP T + + SDG Sbjct: 72 RAVIRCRYNMAPFSVEERK-RPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTREITLLQSDG 205 HSP 2 Score: 35.039 bits (79), Expect = 8.377e-31 Identity = 14/42 (33.33%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 381 KVTLLQMDAKLPTNTFENVMQLAIEGCKAVANYIRRSITREY 506 ++TLLQ D L FE + LA+EGC + + ++ + Y Sbjct: 197 EITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRKRY 238 The following BLAST results are available for this feature:
BLAST of EY675364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675364 ID=EY675364; Name=EY675364; organism=Citrus sinensis; type=EST; length=1007bpback to top |