EY675360

Overview
NameEY675360
Unique NameEY675360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675360 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22
Identity = 63/131 (48.09%), Postives = 79/131 (60.31%), Query Frame = 3 
Query:  165 QEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSS-CSKDAERNISEPPNQQASQNFSKNAYTAIFEHLISLG---PWTTS--YNSQILESSGKKEQLEFWRA-LNGIAKMGIINNQ 536
            QEKAAFIFCVEDRAL C+DCDE IH   S SANHQRFLATGI+VAL+S+ CSK+ E+N  EP N Q   N      T+  +   S     PW     ++   +ES+ KK QL+     L+  + MG   +Q
Sbjct:   61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQPEPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELDWFSDMGFFGDQ 191
[Close]
BLAST of EY675360 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 6.292e-21
Identity = 62/127 (48.82%), Postives = 80/127 (62.99%), Query Frame = 3 
Query:  168 EKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS-SCSKDAERNISEPPNQQASQNFSKNAYTAIFEHLISLGPWTTS--YNSQILESSGK-KEQLEFWRALNGIAKMGIINNQ 536
            EKAAFIFCVEDRAL C+DCDE  H+P + SANHQRFLATGIRVALSS SC+++ E+N  +P NQQ+          A          W T   ++   L+ S K KEQL+    L+ +A+MG+  +Q
Sbjct:   62 EKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHFDPSNQQSLSKPPTQQPAA------PSPLWATDEFFSYSDLDCSNKEKEQLDLGE-LDWLAEMGLFGDQ 181
The following BLAST results are available for this feature:
BLAST of EY675360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
STO_ARATH9.707e-2248.09Salt tolerance protein OS=Arabidopsis thaliana GN=... [more]
STH_ARATH6.292e-2148.82Salt tolerance-like protein OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-E09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675360 ID=EY675360; Name=EY675360; organism=Citrus sinensis; type=EST; length=923bp
AATCAATTGATTGGTGTTACCCTTGATGGGAATTGTTAAGACTTTAAACA
CCAATGCTGGACTCTTGTTTACTTGTTTAAGCTTTTCGCTTCTTAGTTAC
GCATAATACTGATTCCTCTGATTTGATAGTTGCATAAAGCTTACTGTGTG
TCTTATATGATGTTCAGGAAAAGGCAGCTTTCATTTTCTGTGTTGAAGAC
AGAGCACTCTTCTGTAAGGACTGTGATGAACCTATCCATTCACCTGGTAG
TCTTTCTGCTAACCATCAGAGGTTTTTGGCCACTGGAATCCGAGTAGCCT
TAAGCTCTAGTTGTTCCAAAGATGCTGAAAGGAATATATCTGAGCCACCA
AATCAGCAAGCATCACAAAACTTCAGTAAAAATGCCTACACAGCAATCTT
CGAGCATCTCATCTCCTTGGGGCCGTGGACGACTTCTTACAATTCTCAAA
TTTTGGAATCCTCTGGAAAGAAAGAACAACTCGAGTTTTGGAGAGCCTTG
AATGGGATAGCAAAAATGGGAATAATCAACAACCAATTTCCTCAGGGAGG
TCCTGCAGCTGGCTGAAATTACTTCACTTCCCGGGTGTCGCCGCCCAACA
AACTTTAATTAAATCAGAAAGGGCCAAAAAATCAATATGGCATTAAAAAA
ACCAAAGGGTTGGAAACCCCAAAGAAAGATGATGGAGATTTTCCCGTGCC
CCCAAATTTTGGTTAACACATAAAAAAATAATTTCACACGCTCTTCTTTA
GGTGGAAGAAAAACACATTAATTTTCTATGGAGAAGATTAATAATAAAGT
ATTTTTAGAAAAAAGGGTATGGGGTTTTTTTTACAATTTTTTAAGGGGGA
TTAAATAAAAAGAAAAAAAAAAAGAATAAAAAAAAATAAGAAAAAAAAAA
GAGGGGGGGGGGCCGCCATAAGA
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