EY675357

Overview
NameEY675357
Unique NameEY675357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12276 contig Csv1_Contig12276:1..484. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.329e-15
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = -3
Query:  152 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGM 484
            INISS +    +P  + Y+  KGA+  ++   A EL  R I VN ++PG + T+ +  A     ++ A +   T LGR+G PDDI G ++ L +D + W+TG+ + ASGG+
Sbjct:  137 INISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVTEGTHTAGIAGSEMEAGLVAQTPLGRSGQPDDIAGVVAFLASDDARWVTGEVINASGGV 247          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.386e-13
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  AKEL +R ITVN +APG I+TD +    +   DV   +     L R G P D+   ++ L ++G+ ++TGQ +   GGM +
Sbjct:  137 INVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAK---DVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMVM 246          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: YJDA_BACSU (Uncharacterized oxidoreductase yjdA OS=Bacillus subtilis GN=yjdA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = -3
Query:  155 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGG 484
            IN++SG     LPG  AYA+ KGA+   TR  ++EL   GITVN + PG   + +    +R+       ++    +GR G PDD    I+ L +D + WITGQ + + GG
Sbjct:  144 INMTSGQDLGPLPGELAYAATKGAISAFTRSLSQELAPLGITVNAVNPGPTDSTWMTDEIRN------FLSPKFPMGRIGTPDDAARMIAFLASDEAEWITGQIIHSEGG 247          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+ S +      G + YA+ K  V   T+  A+E+ +RG+TVNT+APG I TD +      N D  A   +N   GR G P +I  A+  L +  + +ITG+ +  +GGM++
Sbjct:  134 INVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---NDDQRAATLSNVPAGRLGDPREIASAVVFLASPEAAYITGETLHVNGGMYM 243          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = -3
Query:  155 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATD--FSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGG 484
            INISS L    +P Y AY + K AVE++TR  A+EL    IT N +APG +ATD  F+G   +    V A V +N    R G  +D+   ++ L +D   W+  Q V  +GG
Sbjct:  162 INISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFAG---KSEAAVEAGVKSN-PFERLGKVEDVAPLVAFLASDEGEWVNAQVVRVNGG 269          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  A+EL +RGITVN +APG I +D +      + ++   +     L R G   DI   ++ L +D + +ITGQ +  +GGM++
Sbjct:  137 INLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 246          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  A+EL +RGITVN +APG I +D +      + ++   +     L R G   DI   ++ L +D + +ITGQ +  +GGM++
Sbjct:  137 INLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 246          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  A+EL +RGITVN +APG I +D +      + ++   +     L R G   DI   ++ L +D + +ITGQ +  +GGM++
Sbjct:  137 INLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 246          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  A+EL +RGITVN +APG I +D +      + ++   +     L R G   DI   ++ L +D + +ITGQ +  +GGM++
Sbjct:  137 INLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 246          
BLAST of EY675357 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -3
Query:  146 INISSGLARFSLPGYSAYASMKGAVEVLTRYQAKELGARGITVNTLAPGAIATDFSGGAVRDNPDVNAMVANNTALGRAGLPDDIGGAISTLLADGSNWITGQRVEASGGMFL 484
            IN+SS +     PG + Y + K  V  LT+  A+EL +RGITVN +APG I +D +      + ++   +     L R G   DI   ++ L +D + +ITGQ +  +GGM++
Sbjct:  137 INLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 246          
The following BLAST results are available for this feature:
BLAST of EY675357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
Y182_METEA3.329e-1536.94Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
FABG_BACSU2.386e-1336.283-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
YJDA_BACSU6.941e-1337.27Uncharacterized oxidoreductase yjdA OS=Bacillus su... [more]
FABG_VIBHA6.941e-1335.403-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
SDR1_PICAB9.065e-1339.29Short-chain type dehydrogenase/reductase OS=Picea ... [more]
FABG_STAAW9.065e-1334.513-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS9.065e-1334.513-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR9.065e-1334.513-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN9.065e-1334.513-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM9.065e-1334.513-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675357 ID=EY675357; Name=EY675357; organism=Citrus sinensis; type=EST; length=486bp
CGGTCGGGTACCGGGTCGGGGATTCCCGGGTCGACCACGGCGGCCAGTAC
GCCCATGCCGCCGGCCAGTCCTGGATCAAACTCATGGGTGATTGCCTGTC
AGTTATCCGAAAGCATTGATGCTAGCGGAGAATCTGAGCGCGTTACAGAA
ACATCCCGCCCGAGGCCTCGACGCGCTGCCCGGTGATCCAGTTGCTGCCA
TCGGCCAGCAAGGTGGAAATCGCCCCGCCAATGTCATCCGGCAAGCCCGC
GCGACCGAGTGCGGTGTTGTTGGCGACCATCGCGTTCACGTCCGGGTTGT
CCCGCACCGCGCCGCCGCTGAAGTCGGTGGCAATCGCGCCGGGGGCCAGG
GTGTTGACGGTAATCCCGCGTGCACCCAACTCCTTGGCCTGGTAGCGAGT
CAGCACCTCCACCGCGCCTTTCATCGAGGCGTAGGCCGAGTAACCCGGCA
GGCTGAAGCGCGCGAGGCCGCTGGAGATATTGATGA
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